RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
CCDC188-201ENST00000439765 RBMY1A1P0DJD3 496 aaKnown RBP12.77□□□□□ -0.37
CCDC188-201ENST00000439765 RBMY1CP0DJD4 496 aa12.77□□□□□ -0.37
CCDC188-201ENST00000439765 AKR1C3P42330 323 aa12.77□□□□□ -0.37
CCDC188-201ENST00000439765 RBMY1FQ15415 496 aaKnown RBP12.77□□□□□ -0.37
CCDC188-201ENST00000439765 TMEM75Q8N9X5 138 aa12.77□□□□□ -0.37
CCDC188-201ENST00000439765 LINC00477Q96M19 166 aa12.77□□□□□ -0.37
CCDC188-201ENST00000439765 EPPK1P58107 5090 aaKnown RBP12.76□□□□□ -0.37
CCDC188-201ENST00000439765 TRAV12-2A0A075B6T6 113 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 TRAV34A0A0B4J273 112 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 INSP01308 110 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 IGLV2-11P01706 119 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
CCDC188-201ENST00000439765 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 GOLT1BQ9Y3E0 138 aa12.76□□□□□ -0.37
CCDC188-201ENST00000439765 ALMS1Q8TCU4 4167 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
CCDC188-201ENST00000439765 RPL35P42766 123 aaKnown RBP12.75□□□□□ -0.37
CCDC188-201ENST00000439765 NDUFA5Q16718 116 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 TMEM183BQ1AE95 376 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 TMEM78Q5T7P6 136 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 C1orf158Q8N1D5 194 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 FMC1Q96HJ9 113 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 IGF2BP2-AS1Q96M15 143 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 PSG8Q9UQ74 426 aa12.75□□□□□ -0.37
CCDC188-201ENST00000439765 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 CRXO43186 299 aaPredicted RBP12.74□□□□□ -0.37
CCDC188-201ENST00000439765 AMBPP02760 352 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 CEBPGP53567 150 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 TAS2R60P59551 318 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 NANOS2P60321 138 aaKnown RBP12.74□□□□□ -0.37
CCDC188-201ENST00000439765 UBE2G1P62253 170 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 FLI1Q01543 452 aaPredicted RBP12.74□□□□□ -0.37
CCDC188-201ENST00000439765 C11orf45Q8TAV5 145 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 PARLQ9H300 379 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 ZNF492Q9P255 531 aa12.74□□□□□ -0.37
CCDC188-201ENST00000439765 ZNF138P52744 262 aa12.73□□□□□ -0.37
CCDC188-201ENST00000439765 PRNTQ86SH4 94 aa12.73□□□□□ -0.37
CCDC188-201ENST00000439765 SLC7A5P1Q8MH63 180 aa12.73□□□□□ -0.37
CCDC188-201ENST00000439765 CDKN1BP46527 198 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 J3KRW8 73 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 EMP1P54849 157 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 KIR3DS1Q14943 382 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 ZNF674Q2M3X9 581 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 SOHLH1Q5JUK2 328 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 Q8TAT8 98 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 ODF3Q96PU9 254 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 NEU1Q99519 415 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 CELA1Q9UNI1 258 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
CCDC188-201ENST00000439765 TMEM218A2RU14 115 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 NUPR2A6NF83 97 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 Q86TA4 180 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 TVP23CQ96ET8 276 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 FAM19A4Q96LR4 140 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 SMIM7Q9BQ49 75 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 ZFP30Q9Y2G7 519 aa12.71□□□□□ -0.38
CCDC188-201ENST00000439765 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 SMIM9A6NGZ8 99 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 ZNF727A8MUV8 499 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 LTAP01374 205 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 FAM74A3Q4VXF1 159 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 SAPCD1Q5SSQ6 148 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 BAGE2Q86Y30 109 aa12.7□□□□□ -0.38
CCDC188-201ENST00000439765 BIRC6Q9NR09 4857 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 TRBV20OR9-2A0A075B6H5 130 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 C9JCJ5 164 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 PRM2P04554 102 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 GNG4P50150 75 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 CENPWQ5EE01 88 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 GFI1BQ5VTD9 330 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 LINC00476Q8WZB0 136 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CCDC188-201ENST00000439765 ZNF705GA8MUZ8 300 aaPredicted RBP12.68□□□□□ -0.38
CCDC188-201ENST00000439765 CRISP2P16562 243 aa12.68□□□□□ -0.38
CCDC188-201ENST00000439765 TSPOP30536 169 aa12.68□□□□□ -0.38
CCDC188-201ENST00000439765 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
CCDC188-201ENST00000439765 MLST8Q9BVC4 326 aa12.68□□□□□ -0.38
CCDC188-201ENST00000439765 IGLV2-8P01709 118 aa12.67□□□□□ -0.38
CCDC188-201ENST00000439765 LEPP41159 167 aa12.67□□□□□ -0.38
CCDC188-201ENST00000439765 TMEM183AQ8IXX5 376 aa12.67□□□□□ -0.38
CCDC188-201ENST00000439765 ZFAND2AQ8N6M9 145 aa12.67□□□□□ -0.38
CCDC188-201ENST00000439765 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
CCDC188-201ENST00000439765 HTN1P15515 57 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 CEMP1Q6PRD7 247 aaPredicted RBP12.66□□□□□ -0.38
CCDC188-201ENST00000439765 Q6ZTC4 211 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 COX8CQ7Z4L0 72 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 NHLRC2Q8NBF2 726 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 LINC01587Q99440 93 aa12.66□□□□□ -0.38
CCDC188-201ENST00000439765 TMEM189A5PLL7 270 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 PGPEP1LA6NFU8 196 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 KLLNB2CW77 178 aa12.65□□□□□ -0.38
CCDC188-201ENST00000439765 F8W036 122 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms