RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 RPS20P60866 119 aaKnown RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 SNRPD3P62318 126 aaKnown RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 SMUG1Q53HV7 270 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 FAM162BQ5T6X4 162 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 PRR27Q6MZM9 219 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 C9orf47Q6ZRZ4 202 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 GBGT1Q8N5D6 347 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 NHLRC2Q8NBF2 726 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF738Q8NE65 137 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR11H1Q8NG94 326 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR10J6PQ8NGY7 276 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 LINC00477Q96M19 166 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 PRR25Q96S07 402 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 ASCL2Q99929 193 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF747Q9BV97 191 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 GFRA4Q9GZZ7 299 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 SAV1Q9H4B6 383 aaPredicted RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 RPP21Q9H633 154 aaKnown RBP3□□□□□ -1.93
HMGB1P37-201ENST00000439613 PPP1R14DQ9NXH3 145 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 LENEPQ9Y5L5 61 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 URGCP-MRPS24S4R325 110 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 V9GYV3 84 aa3□□□□□ -1.93
HMGB1P37-201ENST00000439613 SORL1Q92673 2214 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGKV2-40A0A087WW87 121 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV25A0A0B4J276 109 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 A0A1W2PPQ1 181 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 C19orf71A6NCJ1 209 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 IZUMO1RA6ND01 250 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 FABP5P3A8MUU1 101 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZNF705FA8MVS1 300 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 SOCS3O14543 225 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 DUSP14O95147 198 aaKnown RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGKV2D-40P01614 121 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 MT-ND6P03923 174 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 S100A8P05109 93 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 CXCL1P09341 107 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 CMC4P56277 68 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 PROK1P58294 105 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 HIST1H1AQ02539 215 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 FHL3Q13643 280 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 DEFB136Q30KP8 78 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 CD300EQ496F6 205 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 Q6AWC8 147 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 WDR73Q6P4I2 378 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 RASL11AQ6T310 242 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 RBPMS2Q6ZRY4 209 aaKnown RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 Q71RC1 249 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 NDUFA11Q86Y39 141 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 RNF182Q8N6D2 247 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR9G4Q8NGQ1 327 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 TSKUQ8WUA8 353 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 ZC2HC1AQ96GY0 325 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 SGK494Q96LW2 274 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 CITED2Q99967 270 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 VGLL1Q99990 258 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 RNASE7Q9H1E1 156 aaKnown RBP2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 MS4A6AQ9H2W1 248 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 SRD5A3Q9H8P0 318 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 SIGLEC8Q9NYZ4 499 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 NAT8BQ9UHF3 227 aa2.99□□□□□ -1.93
HMGB1P37-201ENST00000439613 A0A1B0GW15 77 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 GAGE12BA1L429 117 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 TMEM189A5PLL7 270 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 GAGE12HA6NDE8 117 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR4C46A6NHA9 309 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 PRAC2D3DTV9 90 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 K7EQG2 157 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 S100A6P06703 90 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 CSN3P07498 182 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 HLA-DMBP28068 263 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 TSPOP30536 169 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 ERCC8Q13216 396 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 DEFB114Q30KQ6 69 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 BEAN1Q3B7T3 259 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 EBLN2Q6P2I7 272 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 FOXI2Q6ZQN5 318 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 C18orf65Q6ZTR6 163 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 ATP5L2Q7Z4Y8 100 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 NUP35Q8NFH5 326 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR8A1Q8NGG7 326 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR2D3Q8NGH3 330 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 OR2K2Q8NGT1 345 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 DYNLRB2Q8TF09 96 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 DCANP1Q8TF63 244 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 DLX4Q92988 240 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 ODF3Q96PU9 254 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 SPAG8Q99932 426 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 GNB1LQ9BYB4 327 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
HMGB1P37-201ENST00000439613 IGKV3-7A0A075B6H7 116 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 TRAV21A0A0B4J279 112 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 A0A0J9YX75 114 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 A0A1B0GUT8 65 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 HIGD1CA8MV81 97 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 F2Z2F3 143 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 SH2D1AO60880 128 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 HLA-DQA1P01909 254 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 ORM1P02763 201 aa2.97□□□□□ -1.93
HMGB1P37-201ENST00000439613 GPX1P07203 203 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms