RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 SFT2D1Q8WV19 159 aa16.74■□□□□ 0.27
PDGFA-205ENST00000426681 K7EQM0 130 aa16.73■□□□□ 0.27
PDGFA-205ENST00000426681 UBE2G2P60604 165 aa16.73■□□□□ 0.27
PDGFA-205ENST00000426681 TRAV8-1A0A0A6YYK1 113 aa16.72■□□□□ 0.27
PDGFA-205ENST00000426681 RAB5CP51148 216 aa16.72■□□□□ 0.27
PDGFA-205ENST00000426681 CYB561D1Q8N8Q1 229 aa16.72■□□□□ 0.27
PDGFA-205ENST00000426681 C2CD4CQ8TF44 421 aa16.72■□□□□ 0.27
PDGFA-205ENST00000426681 ATG101Q9BSB4 218 aa16.72■□□□□ 0.27
PDGFA-205ENST00000426681 TIMM8BQ9Y5J9 83 aaPredicted RBP16.72■□□□□ 0.27
PDGFA-205ENST00000426681 FBLL1A6NHQ2 334 aaKnown RBP16.71■□□□□ 0.27
PDGFA-205ENST00000426681 H2AFB1P0C5Y9 115 aa16.71■□□□□ 0.27
PDGFA-205ENST00000426681 Q6AWC8 147 aa16.71■□□□□ 0.27
PDGFA-205ENST00000426681 TVP23CQ96ET8 276 aa16.71■□□□□ 0.27
PDGFA-205ENST00000426681 ARL2-SNX15V9GYD0 113 aa16.71■□□□□ 0.27
PDGFA-205ENST00000426681 DYNC2H1Q8NCM8 4307 aaKnown RBP16.7■□□□□ 0.26
PDGFA-205ENST00000426681 DEFB131BA0A096LNP1 70 aa16.7■□□□□ 0.26
PDGFA-205ENST00000426681 LCE6AA0A183 80 aa16.7■□□□□ 0.26
PDGFA-205ENST00000426681 IGLV2-11P01706 119 aa16.7■□□□□ 0.26
PDGFA-205ENST00000426681 ANXA2RQ3ZCQ2 193 aa16.7■□□□□ 0.26
PDGFA-205ENST00000426681 EIF4E3Q8N5X7 224 aaKnown RBP16.7■□□□□ 0.26
PDGFA-205ENST00000426681 IFNA7P01567 189 aa16.69■□□□□ 0.26
PDGFA-205ENST00000426681 DAD1P61803 113 aa16.69■□□□□ 0.26
PDGFA-205ENST00000426681 Q6ZQT7 251 aa16.69■□□□□ 0.26
PDGFA-205ENST00000426681 TMEM75Q8N9X5 138 aa16.69■□□□□ 0.26
PDGFA-205ENST00000426681 TREM1Q9NP99 234 aa16.69■□□□□ 0.26
PDGFA-205ENST00000426681 TRAV1-1A0A0B4J248 108 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 SULT1A2P50226 295 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 TCTAP57738 103 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 ZNF680Q8NEM1 530 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 HIST1H2BAQ96A08 127 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 SGK494Q96LW2 274 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 TCEAL7Q9BRU2 100 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 PSG8Q9UQ74 426 aa16.68■□□□□ 0.26
PDGFA-205ENST00000426681 IGHV1OR15-1A0A075B7D0 117 aa16.67■□□□□ 0.26
PDGFA-205ENST00000426681 CBY3A6NI87 242 aa16.67■□□□□ 0.26
PDGFA-205ENST00000426681 RGS13O14921 159 aa16.67■□□□□ 0.26
PDGFA-205ENST00000426681 FLI1Q01543 452 aaPredicted RBP16.67■□□□□ 0.26
PDGFA-205ENST00000426681 C11orf72Q8NBR9 251 aa16.67■□□□□ 0.26
PDGFA-205ENST00000426681 NDFIP1Q9BT67 221 aa16.67■□□□□ 0.26
PDGFA-205ENST00000426681 NOP10Q9NPE3 64 aaKnown RBP16.67■□□□□ 0.26
PDGFA-205ENST00000426681 SNURFLB1AK76 121 aa16.66■□□□□ 0.26
PDGFA-205ENST00000426681 PEX7O00628 323 aa16.66■□□□□ 0.26
PDGFA-205ENST00000426681 PPT1P50897 306 aa16.66■□□□□ 0.26
PDGFA-205ENST00000426681 DAZ2Q13117 558 aaKnown RBP16.66■□□□□ 0.26
PDGFA-205ENST00000426681 IGLL5B9A064 214 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 PAGE4O60829 102 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 DEFB130BP0DP73 79 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 DEFB130AP0DP74 79 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 CST9LP1Q5W188 147 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 LINC00612Q8N6U2 182 aa16.65■□□□□ 0.26
PDGFA-205ENST00000426681 A0A1B0GV50 99 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 F6UZH7 168 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 SAPCD1Q5SSQ6 148 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 IBA57Q5T440 356 aaKnown RBP16.64■□□□□ 0.25
PDGFA-205ENST00000426681 PRNTQ86SH4 94 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 LINC00479Q96M42 142 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 GSN-AS1Q9NRJ2 163 aa16.64■□□□□ 0.25
PDGFA-205ENST00000426681 TRAV21A0A0B4J279 112 aa16.63■□□□□ 0.25
PDGFA-205ENST00000426681 TDRG1Q3Y452 100 aa16.63■□□□□ 0.25
PDGFA-205ENST00000426681 TP53TG3Q9ULZ0 132 aa16.63■□□□□ 0.25
PDGFA-205ENST00000426681 APLNQ9ULZ1 77 aa16.63■□□□□ 0.25
PDGFA-205ENST00000426681 KLF12Q9Y4X4 402 aa16.63■□□□□ 0.25
PDGFA-205ENST00000426681 IGHV4-4A0A075B6R2 117 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 TRAV34A0A0B4J273 112 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 ATP5G3P48201 142 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 TCL1AP56279 114 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 FAM159AQ6UWV7 190 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 FAM210BQ96KR6 192 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 C8orf49Q96NF6 230 aa16.62■□□□□ 0.25
PDGFA-205ENST00000426681 PLECQ15149 4684 aaKnown RBP16.62■□□□□ 0.25
PDGFA-205ENST00000426681 TEX46H3BTG2 121 aa16.61■□□□□ 0.25
PDGFA-205ENST00000426681 NKX2-5P52952 324 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-205ENST00000426681 MUC21Q5SSG8 566 aa16.61■□□□□ 0.25
PDGFA-205ENST00000426681 LYSTQ99698 3801 aa16.6■□□□□ 0.25
PDGFA-205ENST00000426681 CCL20P78556 96 aa16.6■□□□□ 0.25
PDGFA-205ENST00000426681 SMUG1Q53HV7 270 aa16.6■□□□□ 0.25
PDGFA-205ENST00000426681 LINC00476Q8WZB0 136 aa16.6■□□□□ 0.25
PDGFA-205ENST00000426681 TRBV6-1A0A0K0K1D8 114 aa16.59■□□□□ 0.25
PDGFA-205ENST00000426681 HTN3P15516 51 aa16.59■□□□□ 0.25
PDGFA-205ENST00000426681 ZNF80P51504 273 aaPredicted RBP16.59■□□□□ 0.25
PDGFA-205ENST00000426681 Q86TA4 180 aa16.59■□□□□ 0.25
PDGFA-205ENST00000426681 FMC1Q96HJ9 113 aa16.59■□□□□ 0.25
PDGFA-205ENST00000426681 MANBALQ9NQG1 85 aa16.59■□□□□ 0.25
PDGFA-205ENST00000426681 GCGP01275 180 aa16.58■□□□□ 0.24
PDGFA-205ENST00000426681 ATP5G1P05496 136 aa16.58■□□□□ 0.24
PDGFA-205ENST00000426681 PFN1P07737 140 aaKnown RBP16.58■□□□□ 0.24
PDGFA-205ENST00000426681 ZFP30Q9Y2G7 519 aa16.58■□□□□ 0.24
PDGFA-205ENST00000426681 TRGV11A0A075B6L2 103 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 SPINK4O60575 86 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 ZNF415Q09FC8 603 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 TMEM183BQ1AE95 376 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 Q6ZTI0 123 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 COX8CQ7Z4L0 72 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 KCNS1Q96KK3 526 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 C18orf15Q96N68 181 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 NDUFAF3Q9BU61 184 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 NAGKQ9UJ70 344 aa16.57■□□□□ 0.24
PDGFA-205ENST00000426681 GAGE12BA1L429 117 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 GAGE7O76087 117 aa16.56■□□□□ 0.24
PDGFA-205ENST00000426681 GAGE12FP0CL80 117 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms