RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 FCER1GP30273 86 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 TRGV3P03979 118 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ZFP36P26651 326 aaKnown RBP5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 Q6ZQT7 251 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 AGPAT4-IT1Q9H0P7 198 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 G3V318 75 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 K7EP34 96 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 K7ERJ3 54 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 SPRY2O43597 315 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 GOSR1O95249 250 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ODF1Q14990 250 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ZC2HC1BQ5TFG8 222 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ARL6IP6Q8N6S5 226 aa5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 ZNF48Q96MX3 618 aaPredicted RBP5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 NXT2Q9NPJ8 142 aaKnown RBP5.82□□□□□ -1.48
SMARCC1-202ENST00000425518 TRAV40A0A0B4J280 105 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 IGKV3D-20A0A0C4DH25 116 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 SIVA1O15304 175 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 BUB3O43684 328 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 IGKCP01834 107 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 FXYD2P54710 66 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 UFSP1Q6NVU6 142 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 COX8CQ7Z4L0 72 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 A0A1W2PPM0 123 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM8BA6NDV4 472 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 LINC01548A6NM66 108 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 SMIM17P0DL12 118 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 FABP2P12104 132 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM78Q5T7P6 136 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 SAMD5Q5TGI4 173 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 MSRB2Q9Y3D2 182 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 ATP6V0E1O15342 81 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 SPANXN1Q5VSR9 72 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 Q8N9W7 124 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 MYOZ3Q8TDC0 251 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 KLK15Q9H2R5 256 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 LINC00527Q9UJ94 153 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 HHLA3Q9XRX5 114 aa5.81□□□□□ -1.48
SMARCC1-202ENST00000425518 DPM2O94777 84 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 NHP2Q9NX24 153 aaKnown RBP5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 CREBBPQ92793 2442 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 Q8N6K4 173 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 ZNF502Q8TBZ5 544 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 CHAC1Q9BUX1 264 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 MRPL35Q9NZE8 188 aaKnown RBP5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 EFNA4P52798 201 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 LINC01559Q495D7 138 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 Q8N8P6 123 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 CSTL1Q9H114 145 aa5.8□□□□□ -1.48
SMARCC1-202ENST00000425518 TRBV25-1A0A075B6N4 114 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 ZFAND3Q9H8U3 227 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 SPG11Q96JI7 2443 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 H3BVH4 76 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 K7ENP7 123 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 LAGE3Q14657 143 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 MINOS1Q5TGZ0 78 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 FAM110DQ8TAY7 271 aaPredicted RBP5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 C16orf92Q96LL3 132 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 METTL26Q96S19 204 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 CNFNQ9BYD5 112 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 HIF1ANQ9NWT6 349 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 MINOS1-NBL1R4GNA1 71 aa5.79□□□□□ -1.48
SMARCC1-202ENST00000425518 IGHV3OR16-10A0A075B7F0 116 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 ATP5LO75964 103 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 C8orf86Q6ZUL3 223 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 SLC50A1Q9BRV3 221 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 CLPSL1A2RUU4 121 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 M0R381 172 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 IGF1P05019 195 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 RAB9AP51151 201 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 EBI3Q14213 229 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 TMEM219Q86XT9 240 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 MAPKAPK5-AS1Q8N8E1 139 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 NPFFR1Q9GZQ6 430 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 TRAV8-2A0A0B4J237 113 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 OOSP1A8MZH6 123 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 G3V4G9 280 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 SAA4P35542 130 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 DEFB1P60022 68 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 SRSF2Q01130 221 aaKnown RBP5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 OR5A1Q8NGJ0 315 aa5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 HRNRQ86YZ3 2850 aaPredicted RBP5.78□□□□□ -1.48
SMARCC1-202ENST00000425518 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 DEFB104AQ8WTQ1 72 aa5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 EEF1AKMT3Q96AZ1 226 aa5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 ZMAT4Q9H898 229 aa5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.77□□□□□ -1.495e-8■■■■■ 34.8
SMARCC1-202ENST00000425518 S100A4P26447 101 aaKnown RBP5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 ADORA2A-AS1P86434 159 aa5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 SRSF1Q07955 248 aaKnown RBP eCLIP5.77□□□□□ -1.493e-6■□□□□ 9.3
SMARCC1-202ENST00000425518 C1orf122Q6ZSJ8 110 aa5.77□□□□□ -1.49
SMARCC1-202ENST00000425518 SMPXQ9UHP9 88 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms