RNA–Protein interactions for RNA: ENST00000424387.5

TOM1-205, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-205ENST00000424387 OR4X2Q8NGF9 303 aa13.86□□□□□ -0.19
TOM1-205ENST00000424387 COL25A1Q9BXS0 654 aaPredicted RBP13.86□□□□□ -0.19
TOM1-205ENST00000424387 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
TOM1-205ENST00000424387 PIP4P2Q8N4L2 257 aa13.86□□□□□ -0.19
TOM1-205ENST00000424387 IGF2RP11717 2491 aa13.85□□□□□ -0.19
TOM1-205ENST00000424387 IGHV3-66A0A0C4DH42 116 aa13.85□□□□□ -0.19
TOM1-205ENST00000424387 A0A1W2PPM0 123 aa13.85□□□□□ -0.19
TOM1-205ENST00000424387 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
TOM1-205ENST00000424387 NBASA2RRP1 2371 aa13.85□□□□□ -0.19
TOM1-205ENST00000424387 H3BUT2 72 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 J3QR89 54 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 RNF185Q96GF1 192 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 JMJD8Q96S16 334 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 FGF6P10767 208 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 IL17RELQ6ZVW7 336 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 METTL26Q96S19 204 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 ATP6V0BQ99437 205 aa13.84□□□□□ -0.19
TOM1-205ENST00000424387 FABP2P12104 132 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 KIR3DS1Q14943 382 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 PSMG4Q5JS54 123 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 BOD1L2Q8IYS8 172 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 AGPAT4-IT1Q9H0P7 198 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 SPCS1Q9Y6A9 102 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 FXYD7P58549 80 aa13.83□□□□□ -0.2
TOM1-205ENST00000424387 ATRXP46100 2492 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 IGHV3OR16-13A0A075B7E8 117 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 IGHV3-74A0A0B4J1X5 117 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 ATP5G2Q06055 141 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 LY6DQ14210 128 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 MRPL53Q96EL3 112 aaKnown RBP13.82□□□□□ -0.2
TOM1-205ENST00000424387 MAP1LC3AQ9H492 121 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 U3KQE9 123 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 AZU1P20160 251 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 IFI27L1Q96BM0 104 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 HIF1ANQ9NWT6 349 aa13.82□□□□□ -0.2
TOM1-205ENST00000424387 CACNG7P62955 275 aa13.81□□□□□ -0.2
TOM1-205ENST00000424387 TMEM78Q5T7P6 136 aa13.81□□□□□ -0.2
TOM1-205ENST00000424387 IGKV3D-20A0A0C4DH25 116 aa13.8□□□□□ -0.2
TOM1-205ENST00000424387 A1L4Q6 167 aa13.8□□□□□ -0.2
TOM1-205ENST00000424387 LINC01546A6NGU7 62 aa13.8□□□□□ -0.2
TOM1-205ENST00000424387 CD300EQ496F6 205 aaPredicted RBP13.8□□□□□ -0.2
TOM1-205ENST00000424387 ITLN2Q8WWU7 325 aaPredicted RBP13.8□□□□□ -0.2
TOM1-205ENST00000424387 IGHV3-49A0A0A0MS15 119 aa13.8□□□□□ -0.2
TOM1-205ENST00000424387 ZNF207O43670 478 aaKnown RBP13.8□□□□□ -0.2
TOM1-205ENST00000424387 C8orf86Q6ZUL3 223 aa13.8□□□□□ -0.2
TOM1-205ENST00000424387 PPIFP30405 207 aaKnown RBP13.79□□□□□ -0.2
TOM1-205ENST00000424387 SCGB2A2Q13296 93 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 MTURNQ8N3F0 131 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 MOB4Q9Y3A3 225 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
TOM1-205ENST00000424387 TRAV41A0A0B4J266 112 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 SMAD7O15105 426 aaKnown RBP13.79□□□□□ -0.2
TOM1-205ENST00000424387 TNFRSF6BO95407 300 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 C9orf47Q6ZRZ4 202 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 C11orf21Q9P2W6 132 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 COL6A6A6NMZ7 2263 aa13.79□□□□□ -0.2
TOM1-205ENST00000424387 MED13LQ71F56 2210 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 SNAI2O43623 268 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 TCTEX1D4Q5JR98 221 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 FOXI2Q6ZQN5 318 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 TMEM219Q86XT9 240 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 NXT2Q9NPJ8 142 aaKnown RBP13.78□□□□□ -0.2
TOM1-205ENST00000424387 FAM223BA6NKX1 122 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 C19orf84I3L1E1 186 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 GAS8-AS1O95177 125 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 UQCRFS1P47985 274 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 C19orf54Q5BKX5 351 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 ADAMTSL5Q6ZMM2 481 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 FAM223AQ8IWN6 122 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 CLUHP3Q96NS8 147 aa13.78□□□□□ -0.2
TOM1-205ENST00000424387 FOXE3Q13461 319 aa13.77□□□□□ -0.21
TOM1-205ENST00000424387 SPATA25Q9BR10 227 aa13.77□□□□□ -0.21
TOM1-205ENST00000424387 FCER1GP30273 86 aa13.76□□□□□ -0.21
TOM1-205ENST00000424387 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
TOM1-205ENST00000424387 SPTBN1Q01082 2364 aaKnown RBP13.76□□□□□ -0.21
TOM1-205ENST00000424387 LEPP41159 167 aa13.76□□□□□ -0.21
TOM1-205ENST00000424387 PIFOQ8TCI5 191 aa13.76□□□□□ -0.21
TOM1-205ENST00000424387 IGHV1-69DA0A0B4J2H0 117 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 IGHV1-69P01742 117 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 IGHV4-39P01824 125 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 SAMD5Q5TGI4 173 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 C16orf92Q96LL3 132 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 HIVEP3Q5T1R4 2406 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 IGHV3OR16-10A0A075B7F0 116 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 TEX48A0A1B0GUV7 120 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 GAGE12HA6NDE8 117 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 TRGV3P03979 118 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 EVI2AP22794 236 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 RPL24P83731 157 aaKnown RBP13.75□□□□□ -0.21
TOM1-205ENST00000424387 LINC00527Q9UJ94 153 aa13.75□□□□□ -0.21
TOM1-205ENST00000424387 IGHV7-4-1A0A0J9YVY3 117 aa13.74□□□□□ -0.21
TOM1-205ENST00000424387 F8W1H4 67 aa13.74□□□□□ -0.21
TOM1-205ENST00000424387 WFDC3Q8IUB2 231 aa13.74□□□□□ -0.21
TOM1-205ENST00000424387 GATA1P15976 413 aaPredicted RBP13.74□□□□□ -0.21
TOM1-205ENST00000424387 Q8N8P6 123 aa13.74□□□□□ -0.21
TOM1-205ENST00000424387 GLMPQ8WWB7 406 aa13.74□□□□□ -0.21
TOM1-205ENST00000424387 C18orf15Q96N68 181 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms