RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PRR25Q96S07 402 aa11.14□□□□□ -0.63
MSH5-206ENST00000423982 ITPR2Q14571 2701 aa11.14□□□□□ -0.63
MSH5-206ENST00000423982 LEPP41159 167 aa11.14□□□□□ -0.63
MSH5-206ENST00000423982 LYPD1Q8N2G4 141 aa11.14□□□□□ -0.63
MSH5-206ENST00000423982 NOTCH2Q04721 2471 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 ZANQ9Y493 2812 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 RPL24P83731 157 aaKnown RBP11.13□□□□□ -0.63
MSH5-206ENST00000423982 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 HHLA3Q9XRX5 114 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 AGRNO00468 2067 aa11.13□□□□□ -0.63
MSH5-206ENST00000423982 PPIAL4CA0A0B4J2A2 164 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
MSH5-206ENST00000423982 ORM1P02763 201 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 PPIAL4GP0DN37 164 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 CCL19Q99731 98 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 ONECUT1Q9UBC0 465 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 IGHG4P01861 327 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 ERCC8Q13216 396 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 ODF1Q14990 250 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
MSH5-206ENST00000423982 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 PRSS1P07477 247 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 KLRD1Q13241 179 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 SIVA1O15304 175 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 FABP2P12104 132 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 KRTAP10-9P60411 292 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 TNFRSF14Q92956 283 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
MSH5-206ENST00000423982 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 NDPQ00604 133 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 HES1Q14469 280 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 SPOCK3Q9BQ16 436 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 CHAC1Q9BUX1 264 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 PRAC2D3DTV9 90 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 SMIM13P0DJ93 91 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 FOXC2Q99958 501 aa11.1□□□□□ -0.63
MSH5-206ENST00000423982 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
MSH5-206ENST00000423982 UNC79Q9P2D8 2635 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 NBR2O15453 112 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 TNFRSF6BO95407 300 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 MTURNQ8N3F0 131 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 TMEM158Q8WZ71 300 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 MAP1LC3AQ9H492 121 aa11.09□□□□□ -0.63
MSH5-206ENST00000423982 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 PDE6HQ13956 83 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 ZC2HC1BQ5TFG8 222 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 Q6ZQT7 251 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 IGHV3-66A0A0C4DH42 116 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 IGHV4-39P01824 125 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 DYNAPQ8N1N2 210 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 PSMG3-AS1Q96PY0 264 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 IGHV3OR16-13A0A075B7E8 117 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 IGHV3-74A0A0B4J1X5 117 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 TRGV3P03979 118 aa11.08□□□□□ -0.64
MSH5-206ENST00000423982 IGLV11-55A0A075B6I3 123 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 MFAP4P55083 255 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 PHLDA1Q8WV24 401 aaPredicted RBP11.07□□□□□ -0.64
MSH5-206ENST00000423982 BPESC1Q9GZL8 116 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 ZNF469Q96JG9 3925 aaPredicted RBP11.07□□□□□ -0.64
MSH5-206ENST00000423982 TRAV40A0A0B4J280 105 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 IGKCP01834 107 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 FCER1GP30273 86 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 EFNA4P52798 201 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 ATP5J2P56134 94 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 TIMD4Q96H15 378 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 ZMAT4Q9H898 229 aa11.07□□□□□ -0.64
MSH5-206ENST00000423982 IL17RELQ6ZVW7 336 aa11.06□□□□□ -0.64
MSH5-206ENST00000423982 CFHR4Q92496 578 aa11.06□□□□□ -0.64
MSH5-206ENST00000423982 GTSF1LQ9H1H1 148 aa11.06□□□□□ -0.64
MSH5-206ENST00000423982 C21orf62Q9NYP8 219 aa11.06□□□□□ -0.64
MSH5-206ENST00000423982 C11orf21Q9P2W6 132 aa11.06□□□□□ -0.64
MSH5-206ENST00000423982 NCBP2LA6PVI3 153 aaKnown RBP11.05□□□□□ -0.64
MSH5-206ENST00000423982 WFDC2Q14508 124 aa11.05□□□□□ -0.64
MSH5-206ENST00000423982 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
MSH5-206ENST00000423982 CTSGP08311 255 aa11.05□□□□□ -0.64
MSH5-206ENST00000423982 AMTNQ6UX39 209 aa11.05□□□□□ -0.64
MSH5-206ENST00000423982 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
MSH5-206ENST00000423982 RPL7P18124 248 aaKnown RBP11.04□□□□□ -0.64
MSH5-206ENST00000423982 BMI1P35226 326 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 C5orf64Q2M2E5 130 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
MSH5-206ENST00000423982 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 SPRY2O43597 315 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
MSH5-206ENST00000423982 IGKV3D-20A0A0C4DH25 116 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 SMIM17P0DL12 118 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
MSH5-206ENST00000423982 CEND1Q8N111 149 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms