RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 SLC22A18ASQ8N1D0 253 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 PPP1R17O96001 155 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 ITLN1Q8WWA0 313 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 TTTY12Q9BZ98 90 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 EML6Q6ZMW3 1958 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 ZNF22P17026 224 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 FOXG1P55316 489 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 LINC00305Q7Z4B0 112 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 CHCHD2Q9Y6H1 151 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 FAM104BQ5XKR9 115 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 SP5Q6BEB4 398 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 SRXN1Q9BYN0 137 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 MED13LQ71F56 2210 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 CFC1BP0CG36 223 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 CFC1P0CG37 223 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 PLNP26678 52 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 ZNF837Q96EG3 531 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 URB1-AS1Q96HZ7 61 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 PVRIGQ6DKI7 326 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 METRNQ9UJH8 293 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 CCL17Q92583 94 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 IQCF6A8MYZ5 107 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 LINC00643Q86TS7 51 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 TRBV10-2A0A0K0K1G8 114 aa2.71□□□□□ -1.98
SYNE1-212ENST00000423061 PRB2P02812 416 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-212ENST00000423061 MBD6Q96DN6 1003 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 FREM1Q5H8C1 2179 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 TRAV26-2A0A0B4J265 109 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 CRIP2P52943 208 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 EFNA4P52798 201 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 PLEKHB2Q96CS7 222 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 AGPAT4-IT1Q9H0P7 198 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 TMEM258P61165 79 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 FAM90A1Q86YD7 464 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 ADAMTS9Q9P2N4 1935 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 IGFBPL1Q8WX77 278 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 C11orf68Q9H3H3 251 aaKnown RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 CEMP1Q6PRD7 247 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 PHLDA3Q9Y5J5 127 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LYRM9A8MSI8 78 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 CCL11P51671 97 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 FAM74A4Q5TZK3 123 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 NDUFA11Q86Y39 141 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LINC00271P0C7V0 271 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 Q86TA4 180 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 IGF2BP2-AS1Q96M15 143 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 NBL1P41271 181 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 MRPL55Q7Z7F7 128 aaKnown RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 C20orf197Q8N268 126 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 PLA2G2FQ9BZM2 168 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 IGLV2-8P01709 118 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 PMS2CLQ68D20 193 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 ATOX1O00244 68 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 CCL8P80075 99 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 ZNF826PQ6ZT77 177 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LINC01565O15544 149 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 HHLA3Q9XRX5 114 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 MALP21145 153 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LINC00336Q6ZUF6 198 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 ZNF492Q9P255 531 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 ATG2AQ2TAZ0 1938 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 IGHV5-10-1A0A0J9YXX1 117 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.7□□□□□ -1.98
SYNE1-212ENST00000423061 USP17L23D6RBM5 183 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 LINC01561Q8N1V8 128 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 DYNLRB2Q8TF09 96 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 SNURFQ9Y675 71 aa2.7□□□□□ -1.98
SYNE1-212ENST00000423061 CELA2AP08217 269 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 TRAV12-1A0A0B4J245 112 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 C6orf226Q5I0X4 101 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 C15orf61A6NNL5 157 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 PRSS46E5RG02 174 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 TRGV9Q99603 122 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 DEFB109BQ30KR1 87 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 GFRALQ6UXV0 394 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 C11orf44Q8N8P7 122 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 C17orf77Q96MU5 243 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 TRAV12-2A0A075B6T6 113 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 MALRD1Q5VYJ5 2156 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 SAA2P0DJI9 122 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 ARHGAP21Q5T5U3 1957 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 NOTCH4Q99466 2003 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 WI2-2373I1.2A0A1W2PRP0 233 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 SAA1P0DJI8 122 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 PIFOQ8TCI5 191 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 DSCAML1Q8TD84 2053 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 FOXF2Q12947 444 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 TLN1Q9Y490 2541 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 SMIM26A0A096LP01 95 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1BA6NDE4 496 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1EA6NEQ0 496 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 THBDP07204 575 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1DP0C7P1 496 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1A1P0DJD3 496 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1CP0DJD4 496 aa2.69□□□□□ -1.98
SYNE1-212ENST00000423061 RBMY1FQ15415 496 aaKnown RBP2.69□□□□□ -1.98
SYNE1-212ENST00000423061 C10orf55Q5SWW7 151 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms