RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 UBE2G1P62253 170 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 X6R8D5 127 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 S100A9P06702 114 aaKnown RBP12.31□□□□□ -0.44
COL7A1-202ENST00000422991 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
COL7A1-202ENST00000422991 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
COL7A1-202ENST00000422991 TMEM256Q8N2U0 113 aa12.31□□□□□ -0.44
COL7A1-202ENST00000422991 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
COL7A1-202ENST00000422991 IGHV3OR16-12A0A075B7B8 117 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 TRAV12-3A0A0B4J271 114 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 LTAP01374 205 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 SAPCD1Q5SSQ6 148 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 DERL1Q9BUN8 251 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 EIF5A2Q9GZV4 153 aaKnown RBP12.3□□□□□ -0.44
COL7A1-202ENST00000422991 U3KQK5 164 aa12.3□□□□□ -0.44
COL7A1-202ENST00000422991 NDUFS6O75380 124 aaKnown RBP12.29□□□□□ -0.44
COL7A1-202ENST00000422991 ZNF324O75467 553 aaPredicted RBP12.29□□□□□ -0.44
COL7A1-202ENST00000422991 RPL35P42766 123 aaKnown RBP12.29□□□□□ -0.44
COL7A1-202ENST00000422991 Q6AWC8 147 aa12.29□□□□□ -0.44
COL7A1-202ENST00000422991 NEU1Q99519 415 aa12.29□□□□□ -0.44
COL7A1-202ENST00000422991 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
COL7A1-202ENST00000422991 ZFP30Q9Y2G7 519 aa12.29□□□□□ -0.44
COL7A1-202ENST00000422991 TMEM250H0YL14 139 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 H7BYZ3 331 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 RGS13O14921 159 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 Q6ZQT7 251 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 Q8NAQ8 132 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 MED9Q9NWA0 146 aa12.28□□□□□ -0.44
COL7A1-202ENST00000422991 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 MIFP14174 115 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 TAS2R60P59551 318 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 SMUG1Q53HV7 270 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 COX8CQ7Z4L0 72 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 LINC01587Q99440 93 aa12.27□□□□□ -0.45
COL7A1-202ENST00000422991 IGHV4-28A0A0C4DH34 117 aa12.26□□□□□ -0.45
COL7A1-202ENST00000422991 GCGP01275 180 aa12.26□□□□□ -0.45
COL7A1-202ENST00000422991 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
COL7A1-202ENST00000422991 TMEM183AQ8IXX5 376 aa12.26□□□□□ -0.45
COL7A1-202ENST00000422991 ZC2HC1AQ96GY0 325 aa12.26□□□□□ -0.45
COL7A1-202ENST00000422991 PYGO2Q9BRQ0 406 aa12.26□□□□□ -0.45
COL7A1-202ENST00000422991 C11orf68Q9H3H3 251 aaKnown RBP12.26□□□□□ -0.45
COL7A1-202ENST00000422991 TRAV21A0A0B4J279 112 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
COL7A1-202ENST00000422991 SRP19P09132 144 aaKnown RBP12.25□□□□□ -0.45
COL7A1-202ENST00000422991 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 CENPWQ5EE01 88 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 BAGE2Q86Y30 109 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 NHLRC2Q8NBF2 726 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 LINC00467Q9BRT7 94 aa12.25□□□□□ -0.45
COL7A1-202ENST00000422991 TRBV20OR9-2A0A075B6H5 130 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 RAB19A4D1S5 217 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 PRM2P04554 102 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 PFN1P07737 140 aaKnown RBP12.24□□□□□ -0.45
COL7A1-202ENST00000422991 SRSF3P84103 164 aaKnown RBP12.24□□□□□ -0.45
COL7A1-202ENST00000422991 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 MLST8Q9BVC4 326 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 PARLQ9H300 379 aa12.24□□□□□ -0.45
COL7A1-202ENST00000422991 IGHV1OR15-1A0A075B7D0 117 aa12.23□□□□□ -0.45
COL7A1-202ENST00000422991 C9JQL5 133 aa12.23□□□□□ -0.45
COL7A1-202ENST00000422991 GNG4P50150 75 aa12.23□□□□□ -0.45
COL7A1-202ENST00000422991 PEA15Q15121 130 aa12.23□□□□□ -0.45
COL7A1-202ENST00000422991 SMDT1Q9H4I9 107 aa12.23□□□□□ -0.45
COL7A1-202ENST00000422991 A0A0J9YWU9 116 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 C9JCJ5 164 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 DEFB4AO15263 64 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 IGLV2-8P01709 118 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 HTN1P15515 57 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 AZU1P20160 251 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 CEBPGP53567 150 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 ZNF674Q2M3X9 581 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 MUC21Q5SSG8 566 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 EIF4E3Q8N5X7 224 aaKnown RBP12.22□□□□□ -0.45
COL7A1-202ENST00000422991 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 C11orf21Q9P2W6 132 aa12.22□□□□□ -0.45
COL7A1-202ENST00000422991 CRIP1P50238 77 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 ANXA2RQ3ZCQ2 193 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
COL7A1-202ENST00000422991 TMEM263Q8WUH6 116 aaKnown RBP12.21□□□□□ -0.45
COL7A1-202ENST00000422991 C16orf74Q96GX8 76 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 NAGKQ9UJ70 344 aa12.21□□□□□ -0.45
COL7A1-202ENST00000422991 DNAH7Q8WXX0 4024 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 PLAC8L1A1L4L8 177 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 PGPEP1LA6NFU8 196 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 SH2D1AO60880 128 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 FAM159AQ6UWV7 190 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 ZNF493Q6ZR52 646 aa12.2□□□□□ -0.46
COL7A1-202ENST00000422991 CBY3A6NI87 242 aa12.19□□□□□ -0.46
COL7A1-202ENST00000422991 SMIM7Q9BQ49 75 aa12.19□□□□□ -0.46
COL7A1-202ENST00000422991 TP53TG3Q9ULZ0 132 aa12.19□□□□□ -0.46
COL7A1-202ENST00000422991 EMP1P54849 157 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms