RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TCL1AP56279 114 aa17.58■□□□□ 0.4
VEGFA-208ENST00000417285 ZNF266Q14584 549 aa17.58■□□□□ 0.4
VEGFA-208ENST00000417285 PQLC2Q6ZP29 291 aa17.58■□□□□ 0.4
VEGFA-208ENST00000417285 DIRC3C9JPN6 131 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 ESRGQ1W209 222 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 TTC32Q5I0X7 151 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 FAM74A1Q5RGS3 127 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 UPK3BQ9BT76 320 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 OTORQ9NRC9 128 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 KLF12Q9Y4X4 402 aa17.57■□□□□ 0.4
VEGFA-208ENST00000417285 DYNC1H1Q14204 4646 aaKnown RBP17.57■□□□□ 0.4
VEGFA-208ENST00000417285 PCLOQ9Y6V0 5065 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 SPINK4O60575 86 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 EIF3GO75821 320 aaKnown RBP eCLIP17.56■□□□□ 0.4
VEGFA-208ENST00000417285 TNP2Q05952 138 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 CMTM2Q8TAZ6 248 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 HYLS1Q96M11 299 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 LENEPQ9Y5L5 61 aa17.56■□□□□ 0.4
VEGFA-208ENST00000417285 RAB2AP61019 212 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 OR10G4Q8NGN3 311 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 OR10G9Q8NGN4 311 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 OR10G7Q8NGN6 311 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 AQP10Q96PS8 301 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 TP53TG3Q9ULZ0 132 aa17.55■□□□□ 0.4
VEGFA-208ENST00000417285 A0A1W2PPQ1 181 aa17.54■□□□□ 0.4
VEGFA-208ENST00000417285 PGPA6NDG6 321 aa17.54■□□□□ 0.4
VEGFA-208ENST00000417285 Q6ZQT7 251 aa17.54■□□□□ 0.4
VEGFA-208ENST00000417285 TMED6Q8WW62 240 aa17.54■□□□□ 0.4
VEGFA-208ENST00000417285 MRPS16Q9Y3D3 137 aaKnown RBP17.54■□□□□ 0.4
VEGFA-208ENST00000417285 BTF3P20290 206 aaKnown RBP17.53■□□□□ 0.4
VEGFA-208ENST00000417285 ZNF415Q09FC8 603 aa17.53■□□□□ 0.4
VEGFA-208ENST00000417285 ASB13Q8WXK3 278 aa17.53■□□□□ 0.4
VEGFA-208ENST00000417285 VSIG2Q96IQ7 327 aa17.53■□□□□ 0.4
VEGFA-208ENST00000417285 RPH3ALQ9UNE2 315 aa17.53■□□□□ 0.4
VEGFA-208ENST00000417285 ZNF575Q86XF7 245 aa17.52■□□□□ 0.4
VEGFA-208ENST00000417285 ARL6IP6Q8N6S5 226 aa17.52■□□□□ 0.4
VEGFA-208ENST00000417285 HSD17B11Q8NBQ5 300 aa17.52■□□□□ 0.4
VEGFA-208ENST00000417285 OR2G3Q8NGZ4 309 aa17.52■□□□□ 0.4
VEGFA-208ENST00000417285 GIPP09681 153 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-208ENST00000417285 CDC34P49427 236 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-208ENST00000417285 SLAQ13239 276 aa17.51■□□□□ 0.39
VEGFA-208ENST00000417285 Q6AWC8 147 aa17.51■□□□□ 0.39
VEGFA-208ENST00000417285 ST6GAL2Q96JF0 529 aa17.51■□□□□ 0.39
VEGFA-208ENST00000417285 PSMG3Q9BT73 122 aaPredicted RBP17.51■□□□□ 0.39
VEGFA-208ENST00000417285 A0A096LPF7 62 aa17.5■□□□□ 0.39
VEGFA-208ENST00000417285 HMGB3O15347 200 aaKnown RBP17.5■□□□□ 0.39
VEGFA-208ENST00000417285 MUC21Q5SSG8 566 aa17.5■□□□□ 0.39
VEGFA-208ENST00000417285 MRPL16Q9NX20 251 aaKnown RBP17.5■□□□□ 0.39
VEGFA-208ENST00000417285 MBP02144 154 aa17.49■□□□□ 0.39
VEGFA-208ENST00000417285 FAM159AQ6UWV7 190 aa17.49■□□□□ 0.39
VEGFA-208ENST00000417285 GOLT1AQ6ZVE7 132 aa17.49■□□□□ 0.39
VEGFA-208ENST00000417285 MUC4Q99102 2169 aa17.49■□□□□ 0.39
VEGFA-208ENST00000417285 ARL14EPLP0DKL9 152 aa17.48■□□□□ 0.39
VEGFA-208ENST00000417285 ATP6V0CP27449 155 aa17.48■□□□□ 0.39
VEGFA-208ENST00000417285 INO80EQ8NBZ0 244 aaPredicted RBP17.48■□□□□ 0.39
VEGFA-208ENST00000417285 TRGV11A0A075B6L2 103 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 C16orf90A8MZG2 172 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 PAX4O43316 350 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 STAG3L2P0CL84 134 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 STAG3L3P0CL85 134 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 SERF2P84101 59 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 PRO0255Q9UI72 69 aa17.47■□□□□ 0.39
VEGFA-208ENST00000417285 Q5BKY6 102 aa17.46■□□□□ 0.39
VEGFA-208ENST00000417285 RAB24Q969Q5 203 aa17.46■□□□□ 0.39
VEGFA-208ENST00000417285 HHLA3Q9XRX5 114 aa17.46■□□□□ 0.39
VEGFA-208ENST00000417285 ICOSQ9Y6W8 199 aa17.46■□□□□ 0.39
VEGFA-208ENST00000417285 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 TMEM183BQ1AE95 376 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 TMEM183AQ8IXX5 376 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 SPXQ9BT56 116 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 KRTAP1-5Q9BYS1 174 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 MDFICQ9P1T7 246 aa17.45■□□□□ 0.38
VEGFA-208ENST00000417285 SERTM2A0A1B0GWG4 89 aa17.44■□□□□ 0.38
VEGFA-208ENST00000417285 NAGKQ9UJ70 344 aa17.44■□□□□ 0.38
VEGFA-208ENST00000417285 FXYD6-FXYD2A0A087WZ82 144 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 TRAV21A0A0B4J279 112 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 GCHFRP30047 84 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 GNG5P63218 68 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 TREM1Q9NP99 234 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 TNFSF18Q9UNG2 199 aa17.43■□□□□ 0.38
VEGFA-208ENST00000417285 TRAV8-1A0A0A6YYK1 113 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 BORCS7-ASMTA0A0B4J1R7 106 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 CRYBA4P53673 196 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 FHL2Q14192 279 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 MRPL23Q16540 153 aaKnown RBP17.42■□□□□ 0.38
VEGFA-208ENST00000417285 TDRG1Q3Y452 100 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 IQCF2Q8IXL9 164 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 C5orf17Q8NAS9 161 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 SUN5Q8TC36 379 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 NDFIP1Q9BT67 221 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 ACTR3CQ9C0K3 210 aaPredicted RBP17.42■□□□□ 0.38
VEGFA-208ENST00000417285 SH3BGRL3Q9H299 93 aa17.42■□□□□ 0.38
VEGFA-208ENST00000417285 F6UZH7 168 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 SIVA1O15304 175 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 CDK2AP2O75956 126 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 CXorf1O96002 111 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 OR2T35Q8NGX2 323 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 RASL10AQ92737 203 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 TMEM167BQ9NRX6 74 aa17.41■□□□□ 0.38
VEGFA-208ENST00000417285 RNF222A6NCQ9 220 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 195.1 ms