RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 PITX3O75364 302 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 SNAPC5O75971 98 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 CST7O76096 145 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 DUSP14O95147 198 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 MPC2O95563 127 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 HRASP01112 189 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 GIPP09681 153 aaPredicted RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 METTL15P1P0C7V9 234 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 HLA-GP17693 338 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 CXCL2P19875 107 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 TAGLN2P37802 199 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 RPL27AP46776 148 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 RPL29P47914 159 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 MEOX2P50222 304 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 UBE2KP61086 200 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 RPL32P62910 135 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 IL15RAQ13261 267 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 FXYD3Q14802 87 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 KRTAP6-3Q3LI67 103 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 SPANXN5Q5MJ07 72 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 C15orf54Q8N8G6 183 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 TMEM167AQ8TBQ9 72 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 IL22RA2Q969J5 263 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 LSM10Q969L4 123 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 PHYHIPLQ96FC7 376 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 OR2A7Q96R45 310 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 TSNAXQ99598 290 aaKnown RBP3.1□□□□□ -1.91
CSTF1-202ENST00000415828 WFDC1Q9HC57 220 aa3.1□□□□□ -1.91
CSTF1-202ENST00000415828 LRCOL1A6NCL2 159 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 PCP4L1A6NKN8 68 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 RBFOX2O43251 390 aaKnown RBP eCLIP3.09□□□□□ -1.91
CSTF1-202ENST00000415828 EIF3GO75821 320 aaKnown RBP eCLIP3.09□□□□□ -1.91
CSTF1-202ENST00000415828 NDUFA3O95167 84 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 SPART-AS1P0CW21 52 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 TRAPPC2P0DI81 140 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 TRAPPC2BP0DI82 140 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 OR13C7P0DN81 318 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 PSMB6P28072 239 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 MAS1LP35410 378 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 CDKN1BP46527 198 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 TFPI2P48307 235 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 CAV2P51636 162 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 WT1-ASQ06250 92 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 CLINT1Q14677 625 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 FAM222AQ5U5X8 452 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 LAMTOR1Q6IAA8 161 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 C2orf66Q6UXQ4 117 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 NPBQ8NG41 125 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 OR1L8Q8NGR8 309 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 DTD1Q8TEA8 209 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 SRSF12Q8WXF0 261 aaKnown RBP3.09□□□□□ -1.91
CSTF1-202ENST00000415828 SPIN2AQ99865 258 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 SPIN2BQ9BPZ2 258 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 NIPSNAP3BQ9BS92 247 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 CHAC1Q9BUX1 264 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 COMMD5Q9GZQ3 224 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 C11orf1Q9H5F2 150 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 ENY2Q9NPA8 101 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.09□□□□□ -1.91
CSTF1-202ENST00000415828 BET1LQ9NYM9 111 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 PSENENQ9NZ42 101 aa3.09□□□□□ -1.91
CSTF1-202ENST00000415828 MRPL36Q9P0J6 103 aaKnown RBP3.09□□□□□ -1.91
CSTF1-202ENST00000415828 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.92
CSTF1-202ENST00000415828 IGHV3OR16-8A0A075B7F1 116 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 DUXBA0A1W2PPF3 345 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 IGLC7A0M8Q6 106 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 SMCO3A2RU48 225 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 SYNGR2O43760 224 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 OR2J3O76001 311 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 ATG12O94817 140 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 C8orf88P0DMB2 117 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 RNASE2P10153 161 aaKnown RBP3.08□□□□□ -1.92
CSTF1-202ENST00000415828 LGALS7P47929 136 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 SPCS3P61009 180 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 HSPE1P61604 102 aaKnown RBP3.08□□□□□ -1.92
CSTF1-202ENST00000415828 PRCDQ00LT1 54 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 POU2AF1Q16633 256 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 LGALSLQ3ZCW2 172 aaPredicted RBP3.08□□□□□ -1.92
CSTF1-202ENST00000415828 PRSS54Q6PEW0 395 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 TCTE3Q8IZS6 198 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 C9orf62Q8N4C0 152 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 PAXXQ9BUH6 204 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 NMES1Q9C002 83 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 NDUFA4L2Q9NRX3 87 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 TMEM14BQ9NUH8 114 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 COA4Q9NYJ1 87 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 PRNDQ9UKY0 176 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 HSPB11Q9Y547 144 aa3.08□□□□□ -1.92
CSTF1-202ENST00000415828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.07□□□□□ -1.92
CSTF1-202ENST00000415828 IGHV3-35A0A0C4DH35 117 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 A0A0J9YXV3 536 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 LOC100131303A0A0U1RQF7 123 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 UBE2L5PA0A1B0GUS4 154 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 A8MWP6 167 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 SLC25A4P12235 298 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 RPL12P30050 165 aaKnown RBP3.07□□□□□ -1.92
CSTF1-202ENST00000415828 SLC38A11Q08AI6 406 aa3.07□□□□□ -1.92
CSTF1-202ENST00000415828 OR2F1Q13607 317 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms