RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 RGS13O14921 159 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 GNG5P63218 68 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 GOLT1AQ6ZVE7 132 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 CYTL1Q9NRR1 136 aa13.27□□□□□ -0.29
TRIM56-202ENST00000412507 GAGE12BA1L429 117 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 GAGE7O76087 117 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 GAGE12FP0CL80 117 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 GAGE12GP0CL81 117 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 GAGE12IP0CL82 117 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 ANXA2RQ3ZCQ2 193 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 ARL6IP6Q8N6S5 226 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 ZNF680Q8NEM1 530 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 GSN-AS1Q9NRJ2 163 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 TP53TG3Q9ULZ0 132 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 LENEPQ9Y5L5 61 aa13.26□□□□□ -0.29
TRIM56-202ENST00000412507 IGHV1OR15-1A0A075B7D0 117 aa13.25□□□□□ -0.29
TRIM56-202ENST00000412507 CXorf1O96002 111 aa13.25□□□□□ -0.29
TRIM56-202ENST00000412507 DAZ2Q13117 558 aaKnown RBP13.25□□□□□ -0.29
TRIM56-202ENST00000412507 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
TRIM56-202ENST00000412507 POM121L12Q8N7R1 296 aa13.25□□□□□ -0.29
TRIM56-202ENST00000412507 TMED6Q8WW62 240 aa13.25□□□□□ -0.29
TRIM56-202ENST00000412507 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 Q6ZTI0 123 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 IQCF2Q8IXL9 164 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 KCNRGQ8N5I3 272 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 TMEM167BQ9NRX6 74 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 FRAS1Q86XX4 4008 aa13.24□□□□□ -0.29
TRIM56-202ENST00000412507 CTXND1A0A1B0GTU2 59 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 MUC21Q5SSG8 566 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 AKR1C8PQ5T2L2 129 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 UBE2DNLQ8IWF7 75 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 C15orf53Q8NAA6 179 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
TRIM56-202ENST00000412507 KANTRA0A1W2PQU2 76 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 SUMO1P63165 101 aaKnown RBP13.22□□□□□ -0.29
TRIM56-202ENST00000412507 Q6AWC8 147 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 SGK494Q96LW2 274 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 ARPC5LQ9BPX5 153 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 TMPRSS5Q9H3S3 457 aa13.22□□□□□ -0.29
TRIM56-202ENST00000412507 TRGV1A0A0A0MS02 117 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 GGTLC3B5MD39 225 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 TCRAP04437 139 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 TCL1AP56279 114 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 OR5I1Q13606 314 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 LGALSLQ3ZCW2 172 aaPredicted RBP13.21□□□□□ -0.29
TRIM56-202ENST00000412507 IBA57Q5T440 356 aaKnown RBP13.21□□□□□ -0.29
TRIM56-202ENST00000412507 TMUB2Q71RG4 321 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 C9orf62Q8N4C0 152 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 TVP23CQ96ET8 276 aa13.21□□□□□ -0.29
TRIM56-202ENST00000412507 BCL2L11O43521 198 aa13.2□□□□□ -0.3
TRIM56-202ENST00000412507 NUDT3O95989 172 aa13.2□□□□□ -0.3
TRIM56-202ENST00000412507 HOXA5P20719 270 aa13.2□□□□□ -0.3
TRIM56-202ENST00000412507 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-202ENST00000412507 FGF8P55075 233 aaPredicted RBP13.2□□□□□ -0.3
TRIM56-202ENST00000412507 TREM1Q9NP99 234 aa13.2□□□□□ -0.3
TRIM56-202ENST00000412507 SERTM2A0A1B0GWG4 89 aa13.19□□□□□ -0.3
TRIM56-202ENST00000412507 F6UZH7 168 aa13.19□□□□□ -0.3
TRIM56-202ENST00000412507 SPINK4O60575 86 aa13.19□□□□□ -0.3
TRIM56-202ENST00000412507 EIF5AP63241 154 aaKnown RBP13.19□□□□□ -0.3
TRIM56-202ENST00000412507 EPDR1Q9UM22 224 aa13.19□□□□□ -0.3
TRIM56-202ENST00000412507 BIRC6Q9NR09 4857 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 TRGV2A0A075B6R0 118 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 A0A1W2PRE2 83 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 K7EQM0 130 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 UBE2G2P60604 165 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 ZNF415Q09FC8 603 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 TMEM183BQ1AE95 376 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 RNF212Q495C1 297 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 FAM159AQ6UWV7 190 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 TMEM183AQ8IXX5 376 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
TRIM56-202ENST00000412507 NAGKQ9UJ70 344 aa13.18□□□□□ -0.3
TRIM56-202ENST00000412507 TRAV26-1A0A087WT03 109 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 A0A0J9YY99 117 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 MAP1LC3B2A6NCE7 125 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 C8orf49Q96NF6 230 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 ZNF471Q9BX82 626 aaPredicted RBP13.17□□□□□ -0.3
TRIM56-202ENST00000412507 MAP1LC3BQ9GZQ8 125 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 MDFICQ9P1T7 246 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 PSG8Q9UQ74 426 aa13.17□□□□□ -0.3
TRIM56-202ENST00000412507 TRAV21A0A0B4J279 112 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 M0R2N4 97 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 CYB561D1Q8N8Q1 229 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 C18orf15Q96N68 181 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 NDFIP1Q9BT67 221 aa13.16□□□□□ -0.3
TRIM56-202ENST00000412507 DNAH17Q9UFH2 4485 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 IGLV2-18A0A075B6J9 118 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 IGLV2-11P01706 119 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 FHITP49789 147 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-202ENST00000412507 LGALS9BQ3B8N2 356 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 SLC51BQ86UW2 128 aa13.15□□□□□ -0.3
TRIM56-202ENST00000412507 DNAH2Q9P225 4427 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
TRIM56-202ENST00000412507 FAM74A7A6NL05 159 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms