RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 TEX48A0A1B0GUV7 120 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 Q6ZWC4 215 aa13.21□□□□□ -0.29
PCDHA13-202ENST00000409494 FXYD7P58549 80 aa13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 SPINK13Q1W4C9 94 aa13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 NCOA6Q14686 2063 aaPredicted RBP13.21□□□□□ -0.3
PCDHA13-202ENST00000409494 IGHG2P01859 326 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 MYCNOSP40205 109 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 FXYD5Q96DB9 178 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 NOTCH2Q04721 2471 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 NOTCH3Q9UM47 2321 aa13.2□□□□□ -0.3
PCDHA13-202ENST00000409494 LY6G5BQ8NDX9 201 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 PYGO2Q9BRQ0 406 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 I3L2K1 104 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 SS18Q15532 418 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 FREM1Q5H8C1 2179 aa13.19□□□□□ -0.3
PCDHA13-202ENST00000409494 LMO4P61968 165 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 Q8N7P7 452 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 SLC25A20O43772 301 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 A0A087X0K7 114 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 DEFB130BP0DP73 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 DEFB130AP0DP74 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 CKS1BP61024 79 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 ZMAT4Q9H898 229 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 UBE2V1Q13404 147 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 MSMPQ1L6U9 139 aa13.18□□□□□ -0.3
PCDHA13-202ENST00000409494 TRBV7-9A0A0J9YWB2 115 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 SMIM27A0A1W2PRY6 76 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 COA6Q5JTJ3 125 aaKnown RBP13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 K7EIM0 57 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 FAM104BQ5XKR9 115 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 HIVEP2P31629 2446 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 ZFP36P26651 326 aaKnown RBP13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF493Q6ZR52 646 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 GPHB5Q86YW7 130 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 NCKAP5O14513 1909 aa13.17□□□□□ -0.3
PCDHA13-202ENST00000409494 CLPSL1A2RUU4 121 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM158Q8WZ71 300 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 CGB3P0DN86 165 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 CGB7P0DN87 165 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 IGLC3P0DOY3 106 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 MEGF9Q9H1U4 602 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 WISP2O76076 250 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 AZU1P20160 251 aa13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
PCDHA13-202ENST00000409494 INSL3P51460 131 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TMEM141Q96I45 108 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 IGHV3-53P01767 116 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 SAMD5Q5TGI4 173 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 ZNF843Q8N446 348 aa13.15□□□□□ -0.3
PCDHA13-202ENST00000409494 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 A6NDX4 124 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 RMI2Q96E14 147 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ZNF479Q96JC4 524 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 NUP210LQ5VU65 1888 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 BLCAPP62952 87 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
PCDHA13-202ENST00000409494 ANXA2RQ3ZCQ2 193 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 BCL6BQ8N143 479 aaPredicted RBP13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 IGHV3-73A0A0B4J1V6 119 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 I3L3M4 83 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 K7EN84 100 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 COX11Q9Y6N1 276 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 F5H768 121 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 CTSGP08311 255 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 MTURNQ8N3F0 131 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 CD5LO43866 347 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 AJUBAQ96IF1 538 aa13.13□□□□□ -0.31
PCDHA13-202ENST00000409494 C16orf54Q6UWD8 224 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 A0A087WWL8 130 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 Q8N8P6 123 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 ODF3BA8MYP8 253 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 K7EMI3 77 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 IGLV2-23P01705 113 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 M0R2P5 195 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 C1orf159Q96HA4 380 aa13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 NAA38Q9BRA0 125 aaKnown RBP13.12□□□□□ -0.31
PCDHA13-202ENST00000409494 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 ODF3L1Q8IXM7 274 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 MYMXA0A1B0GTQ4 84 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 A0A1B0GV72 72 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 PSCAO43653 123 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 LTAP01374 205 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C8orf49Q96NF6 230 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
PCDHA13-202ENST00000409494 C6orf226Q5I0X4 101 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms