RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 TLN2Q9Y4G6 2542 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 IGHV4OR15-8A0A075B7B6 117 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 A0A087WW49 117 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 TMEM213A2RRL7 107 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 HSBP1O75506 76 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 IGLC6P0CF74 106 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 NTF3P20783 257 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 CTRLP40313 264 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 FAM19A2Q8N3H0 131 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 TMEM86BQ8N661 226 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 RNF152Q8N8N0 203 aa15.68■□□□□ 0.1
USP39-203ENST00000409470 NAGKQ9UJ70 344 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 LENEPQ9Y5L5 61 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 SYNJ2BPP57105 145 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 DEFB1P60022 68 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 ZNF493Q6ZR52 646 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 NIT1Q86X76 327 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 ZNF575Q86XF7 245 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 FOXC2Q99958 501 aa15.67■□□□□ 0.1
USP39-203ENST00000409470 TWIST1Q15672 202 aa15.66■□□□□ 0.1
USP39-203ENST00000409470 WFDC3Q8IUB2 231 aa15.66■□□□□ 0.1
USP39-203ENST00000409470 KLHDC1Q8N7A1 406 aa15.66■□□□□ 0.1
USP39-203ENST00000409470 LINC00587B1AMM8 73 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 ID1P41134 155 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 REC114Q7Z4M0 266 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 IGKV3D-20A0A0C4DH25 116 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 J3KRW8 73 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 HOXD3P31249 432 aaPredicted RBP15.65■□□□□ 0.1
USP39-203ENST00000409470 SAMD13Q5VXD3 122 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 OR8A1Q8NGG7 326 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 C11orf21Q9P2W6 132 aa15.65■□□□□ 0.1
USP39-203ENST00000409470 FLNAP21333 2647 aaKnown RBP15.64■□□□□ 0.09
USP39-203ENST00000409470 F6UB75 175 aa15.64■□□□□ 0.09
USP39-203ENST00000409470 KRTDAPP60985 99 aa15.64■□□□□ 0.09
USP39-203ENST00000409470 M0QZ24 198 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 LGALS9O00182 355 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 PKIAP61925 76 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 PRO1933Q9H354 126 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 YAE1D1Q9NRH1 226 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 TSTD3H0UI37 97 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 M0R2Z0 102 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 PRR9Q5T870 116 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 DCANP1Q8TF63 244 aa15.63■□□□□ 0.09
USP39-203ENST00000409470 PDZD2O15018 2839 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 DNAJC9-AS1A6NH13 148 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 TFPI2P48307 235 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 FAM104BQ5XKR9 115 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 AMN1Q8IY45 258 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 URB1-AS1Q96HZ7 61 aa15.62■□□□□ 0.09
USP39-203ENST00000409470 SONP18583 2426 aaKnown RBP15.62■□□□□ 0.09
USP39-203ENST00000409470 CD5LO43866 347 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 Q6ZQT7 251 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 MS4A6AQ9H2W1 248 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 RNF114Q9Y508 228 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 KRTAP1-1Q07627 177 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 C18orf65Q6ZTR6 163 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 ZFAND2AQ8N6M9 145 aa15.61■□□□□ 0.09
USP39-203ENST00000409470 CHCHD1Q96BP2 118 aaKnown RBP15.61■□□□□ 0.09
USP39-203ENST00000409470 KHDC1LQ5JSQ8 128 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 ZNF664Q8N3J9 261 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 CNFNQ9BYD5 112 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 CSN3P07498 182 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 LINC00614P0C842 121 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 DEFB136Q30KP8 78 aa15.6■□□□□ 0.09
USP39-203ENST00000409470 D6R8Y8 96 aa15.59■□□□□ 0.09
USP39-203ENST00000409470 Q6ZSV7 163 aa15.59■□□□□ 0.09
USP39-203ENST00000409470 MSRB1Q9NZV6 116 aa15.59■□□□□ 0.09
USP39-203ENST00000409470 TRAV21A0A0B4J279 112 aa15.58■□□□□ 0.09
USP39-203ENST00000409470 C2orf70A6NJV1 201 aa15.58■□□□□ 0.09
USP39-203ENST00000409470 SLURP1P55000 103 aa15.58■□□□□ 0.08
USP39-203ENST00000409470 MRPL51Q4U2R6 128 aaKnown RBP15.58■□□□□ 0.08
USP39-203ENST00000409470 FAM19A4Q96LR4 140 aa15.58■□□□□ 0.08
USP39-203ENST00000409470 TMEM191AQ9H0A3 160 aa15.58■□□□□ 0.08
USP39-203ENST00000409470 ZNF688P0C7X2 276 aa15.57■□□□□ 0.08
USP39-203ENST00000409470 RNASE4P34096 147 aaKnown RBP15.57■□□□□ 0.08
USP39-203ENST00000409470 SNRPD3P62318 126 aaKnown RBP15.57■□□□□ 0.08
USP39-203ENST00000409470 PMCHL1Q16048 86 aa15.57■□□□□ 0.08
USP39-203ENST00000409470 ORMDL3Q8N138 153 aa15.57■□□□□ 0.08
USP39-203ENST00000409470 DPF1Q92782 380 aa15.57■□□□□ 0.08
USP39-203ENST00000409470 MYO9AB2RTY4 2548 aa15.57■□□□□ 0.08
USP39-203ENST00000409470 LINC01619G3V211 115 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 C3orf79P0CE67 100 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 PSMG4Q5JS54 123 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 C4orf3Q8WVX3 66 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 PRELID3AQ96N28 172 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 ESM1Q9NQ30 184 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 ITPR2Q14571 2701 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 TRBV7-9A0A0J9YWB2 115 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 TCTEX1D4Q5JR98 221 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 OR11H1Q8NG94 326 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 U3KQK5 164 aa15.56■□□□□ 0.08
USP39-203ENST00000409470 UNC79Q9P2D8 2635 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 IGHV1-24A0A0C4DH33 117 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 CKS2P33552 79 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 PRSS3P2Q8NHM4 247 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 K7EQG2 157 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 OR10AG1Q8NH19 301 aa15.55■□□□□ 0.08
USP39-203ENST00000409470 DMRTA1Q5VZB9 504 aa15.54■□□□□ 0.08
USP39-203ENST00000409470 TEX43Q6ZNM6 134 aa15.54■□□□□ 0.08
USP39-203ENST00000409470 OR1N2Q8NGR9 330 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms