RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RAB31Q13636 194 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 ZNF846Q147U1 533 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 FAM122CQ6P4D5 195 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 NRARPQ7Z6K4 114 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 OR4C5Q8NGB2 326 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 ZNF492Q9P255 531 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 C9orf170A2RU37 121 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 TAS2R30P59541 319 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 TMEM183BQ1AE95 376 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 TMEM183AQ8IXX5 376 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 C12orf45Q8N5I9 185 aaPredicted RBP10.99□□□□□ -0.65
CHMP3-203ENST00000409225 Q8TAT8 98 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 TRIM63Q969Q1 353 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 PFDN5Q99471 154 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 SPXQ9BT56 116 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
CHMP3-203ENST00000409225 PDE6HQ13956 83 aa10.98□□□□□ -0.65
CHMP3-203ENST00000409225 TMEM14CQ9P0S9 112 aa10.98□□□□□ -0.65
CHMP3-203ENST00000409225 SMIM18P0DKX4 95 aa10.97□□□□□ -0.65
CHMP3-203ENST00000409225 ZNF138P52744 262 aa10.97□□□□□ -0.65
CHMP3-203ENST00000409225 UBE2MP61081 183 aaKnown RBP10.97□□□□□ -0.65
CHMP3-203ENST00000409225 LAGE3Q14657 143 aa10.97□□□□□ -0.65
CHMP3-203ENST00000409225 IAH1Q2TAA2 248 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-203ENST00000409225 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
CHMP3-203ENST00000409225 GSKIPQ9P0R6 139 aa10.97□□□□□ -0.65
CHMP3-203ENST00000409225 TRGV11A0A075B6L2 103 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 C7orf66A4D0T2 115 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 RBFOX3A6NFN3 312 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 RS1O15537 224 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 GATA1P15976 413 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-203ENST00000409225 TDRG1Q3Y452 100 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 PYDC2Q56P42 97 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 Q8N3U1 123 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 DYNC2LI1Q8TCX1 351 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 SLC39A9Q9NUM3 307 aa10.96□□□□□ -0.65
CHMP3-203ENST00000409225 PFN1P07737 140 aaKnown RBP10.95□□□□□ -0.66
CHMP3-203ENST00000409225 LELP1Q5T871 98 aa10.95□□□□□ -0.66
CHMP3-203ENST00000409225 FAM159AQ6UWV7 190 aa10.95□□□□□ -0.66
CHMP3-203ENST00000409225 BAALCQ8WXS3 180 aa10.95□□□□□ -0.66
CHMP3-203ENST00000409225 GPN1Q9HCN4 374 aaPredicted RBP10.95□□□□□ -0.66
CHMP3-203ENST00000409225 IGLV2-8P01709 118 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 RPL29P47914 159 aaKnown RBP10.94□□□□□ -0.66
CHMP3-203ENST00000409225 ASAH1Q13510 395 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 ZNF266Q14584 549 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 BAK1Q16611 211 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 UQCC1Q9NVA1 299 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 NAGKQ9UJ70 344 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
CHMP3-203ENST00000409225 TRBV7-9A0A0J9YWB2 115 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 L7N2F9 121 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 CST7O76096 145 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 MBPP02686 304 aaPredicted RBP10.93□□□□□ -0.66
CHMP3-203ENST00000409225 BCAP31P51572 246 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 HNRNPA3P51991 378 aaKnown RBP10.93□□□□□ -0.66
CHMP3-203ENST00000409225 VAMP2P63027 116 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 BAXQ07812 192 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 C20orf85Q9H1P6 137 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 LRP2P98164 4655 aa10.93□□□□□ -0.66
CHMP3-203ENST00000409225 TRAV8-3A0A0A6YYJ7 113 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 UBE2L5PA0A1B0GUS4 154 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 M0R2P5 195 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
CHMP3-203ENST00000409225 ACOT6Q3I5F7 207 aaPredicted RBP10.92□□□□□ -0.66
CHMP3-203ENST00000409225 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 FLVCR2Q9UPI3 526 aa10.92□□□□□ -0.66
CHMP3-203ENST00000409225 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
CHMP3-203ENST00000409225 GNRH2O43555 120 aa10.91□□□□□ -0.66
CHMP3-203ENST00000409225 CAV2P51636 162 aa10.91□□□□□ -0.66
CHMP3-203ENST00000409225 GCSAMLQ5JQS6 135 aa10.91□□□□□ -0.66
CHMP3-203ENST00000409225 Q6AWC8 147 aa10.91□□□□□ -0.66
CHMP3-203ENST00000409225 PRADC1Q9BSG0 188 aa10.91□□□□□ -0.66
CHMP3-203ENST00000409225 SLIRPQ9GZT3 109 aaKnown RBP10.91□□□□□ -0.66
CHMP3-203ENST00000409225 NBEAP1P0C6P0 100 aa10.9□□□□□ -0.66
CHMP3-203ENST00000409225 DAZ4Q86SG3 579 aaKnown RBP10.9□□□□□ -0.66
CHMP3-203ENST00000409225 DEDD2Q8WXF8 326 aa10.9□□□□□ -0.66
CHMP3-203ENST00000409225 GTSF1LQ9H1H1 148 aa10.9□□□□□ -0.66
CHMP3-203ENST00000409225 DAZ3Q9NR90 486 aaKnown RBP10.9□□□□□ -0.66
CHMP3-203ENST00000409225 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
CHMP3-203ENST00000409225 TNXBP22105 4242 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 FAM24AA6NFZ4 105 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 MT1HL1P0DM35 61 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 FGF7P21781 194 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 RHOHQ15669 191 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 Q8N976 141 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 ATP6V0E2Q8NHE4 81 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 DAZAP1Q96EP5 407 aaKnown RBP10.89□□□□□ -0.67
CHMP3-203ENST00000409225 PHYHIPLQ96FC7 376 aa10.89□□□□□ -0.67
CHMP3-203ENST00000409225 C5orf51A6NDU8 294 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 NDUFB6O95139 128 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 OR10J4P0C629 311 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 CSN1S1P47710 185 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 VWC2Q2TAL6 325 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 TOR2AQ5JU69 321 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 MIR17HGQ75NE6 70 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 FAM167A-AS1Q96KT0 104 aa10.88□□□□□ -0.67
CHMP3-203ENST00000409225 V9GYH0 126 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms