RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
HERC3-203ENST00000407637 Q8N1Y9 231 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 IGHV3-72A0A0B4J1Y9 119 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
HERC3-203ENST00000407637 IGKV1-17P01599 117 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 CFC1BP0CG36 223 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 CFC1P0CG37 223 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 CCL3L1P16619 93 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 RPL27AP46776 148 aaKnown RBP9.92□□□□□ -0.82
HERC3-203ENST00000407637 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 LINC00574Q9H8X3 128 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 CEACAM4O75871 244 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 TMEM155Q4W5P6 130 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 SPRR3Q9UBC9 169 aa9.92□□□□□ -0.82
HERC3-203ENST00000407637 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 ENSAO43768 121 aaKnown RBP9.91□□□□□ -0.82
HERC3-203ENST00000407637 IGFBP4P22692 258 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 C10orf126Q8N4M7 172 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
HERC3-203ENST00000407637 TNRC18O15417 2968 aaPredicted RBP9.91□□□□□ -0.82
HERC3-203ENST00000407637 COX6B1P14854 86 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 CD40P25942 277 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 TDHQ8IZJ6 230 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 NRACQ8N912 160 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 SPENQ96T58 3664 aaKnown RBP9.91□□□□□ -0.82
HERC3-203ENST00000407637 LINC01587Q99440 93 aa9.91□□□□□ -0.82
HERC3-203ENST00000407637 TEX49A0A1B0GTD5 131 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 CNTFRP26992 372 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 CNEP1R1Q8N9A8 125 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 MALRD1Q5VYJ5 2156 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 IGHV1-18A0A0C4DH31 117 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 TM4SF5O14894 197 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 IGHG4P01861 327 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 FAM57AQ8TBR7 257 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 PSMG3-AS1Q96PY0 264 aa9.9□□□□□ -0.82
HERC3-203ENST00000407637 KALRNO60229 2985 aa9.9□□□□□ -0.83
HERC3-203ENST00000407637 TMEM30BQ3MIR4 351 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 Q6ZS46 218 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 Q6ZT83 130 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 SAP25Q8TEE9 199 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 TMEM190Q8WZ59 177 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 SPANXA1Q9NS26 97 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 IGFL4Q6B9Z1 124 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 NEXN-AS1Q8NBZ9 246 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 RNF125Q96EQ8 232 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 SCGB3A1Q96QR1 104 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 C21orf62Q9NYP8 219 aa9.89□□□□□ -0.83
HERC3-203ENST00000407637 A0A0J9YY99 117 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 WT1P19544 449 aaPredicted RBP9.88□□□□□ -0.83
HERC3-203ENST00000407637 COX8CQ7Z4L0 72 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 NRGNQ92686 78 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 PRO1854Q9UHT4 67 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 I3L2K1 104 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 FOXC1Q12948 553 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 ZNF491Q8N8L2 437 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 RNF7Q9UBF6 113 aa9.88□□□□□ -0.83
HERC3-203ENST00000407637 ASPMQ8IZT6 3477 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 TRAV2A0A0B4J234 112 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 H7C2G1 150 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 LINC00694P0DN24 101 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 HLA-DMBP28068 263 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 CXCL12P48061 93 aa9.87□□□□□ -0.83
HERC3-203ENST00000407637 TEX22C9J3V5 150 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 PDE6HQ13956 83 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 C5orf47Q569G3 176 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 S4R3C0 116 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 ZZEF1O43149 2961 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 TRGV5A0A0B4J1U4 118 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 LOC107984640A0A0U1RRK4 108 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 ELANEP08246 267 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 IGLV1-44P01699 117 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 CFHR4Q92496 578 aa9.86□□□□□ -0.83
HERC3-203ENST00000407637 RPL7P18124 248 aaKnown RBP9.85□□□□□ -0.83
HERC3-203ENST00000407637 IL17RELQ6ZVW7 336 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 CACNA1GO43497 2377 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 H3BMM0 161 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 TIMM23O14925 209 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
HERC3-203ENST00000407637 EMP1P54849 157 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 UBE2WQ96B02 151 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
HERC3-203ENST00000407637 IGHV4-39P01824 125 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 TCF15Q12870 199 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 ERCC8Q13216 396 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
HERC3-203ENST00000407637 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
HERC3-203ENST00000407637 ZNF56Q15929 161 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 LINC01620Q4KN68 170 aa9.84□□□□□ -0.83
HERC3-203ENST00000407637 K7EIM0 57 aa9.83□□□□□ -0.84
HERC3-203ENST00000407637 LGALS9O00182 355 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms