RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 LYPD1Q8N2G4 141 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 CMTM2Q8TAZ6 248 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 PHYHIPLQ96FC7 376 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 LINC00477Q96M19 166 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 LINC01587Q99440 93 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 ZNF471Q9BX82 626 aaPredicted RBP4.41□□□□□ -1.7
RPA3-204ENST00000406109 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 Q9H3A6 140 aa4.41□□□□□ -1.7
RPA3-204ENST00000406109 IGLV2-18A0A075B6J9 118 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 IGKV2-40A0A087WW87 121 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 DEFB131BA0A096LNP1 70 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 ZNF705GA8MUZ8 300 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 NPIPB6E9PJ23 425 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 CRXO43186 299 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 IGKV2D-40P01614 121 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 HBE1P02100 147 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 C1QBP02746 253 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 PRM2P04554 102 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 STAG3L2P0CL84 134 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 STAG3L3P0CL85 134 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 GCHFRP30047 84 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 LEPP41159 167 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 FGF8P55075 233 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 EIF5AP63241 154 aaKnown RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 TMEM78Q5T7P6 136 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 ZNF705AQ6ZN79 300 aaPredicted RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 ZNF767PQ75MW2 155 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 SSX7Q7RTT5 188 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 BAP18Q8IXM2 172 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 RXFP4Q8TDU9 374 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 MRPL53Q96EL3 112 aaKnown RBP4.4□□□□□ -1.71
RPA3-204ENST00000406109 VGLL1Q99990 258 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 OTORQ9NRC9 128 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 RPH3ALQ9UNE2 315 aa4.4□□□□□ -1.71
RPA3-204ENST00000406109 TRAV12-3A0A0B4J271 114 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 CTXND1A0A1B0GTU2 59 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 LOC102723971A0A1B0GUV8 181 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 DIRC3C9JPN6 131 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 SLC25A5P05141 298 aaKnown RBP4.39□□□□□ -1.71
RPA3-204ENST00000406109 SEC11BP0C7V7 166 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 TPT1P13693 172 aaKnown RBP4.39□□□□□ -1.71
RPA3-204ENST00000406109 AZU1P20160 251 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 RNASE4P34096 147 aaKnown RBP4.39□□□□□ -1.71
RPA3-204ENST00000406109 ZNF138P52744 262 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 SUMO1P63165 101 aaKnown RBP4.39□□□□□ -1.71
RPA3-204ENST00000406109 CD300CQ08708 224 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 KIR3DS1Q14943 382 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 ZNF726P1Q15940 193 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 RRN3P1Q2M238 152 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 C9orf47Q6ZRZ4 202 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 CCDC28AQ8IWP9 274 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 STOML3Q8TAV4 291 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 SFT2D1Q8WV19 159 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 NEU1Q99519 415 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 NDUFAF3Q9BU61 184 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 TMPRSS5Q9H3S3 457 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 TMEM167BQ9NRX6 74 aa4.39□□□□□ -1.71
RPA3-204ENST00000406109 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 A0A1B0GV50 99 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 TMEM189A5PLL7 270 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 RBAKDNA6NC62 111 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 UMAD1C9J7I0 102 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 GPX1P07203 203 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 SPART-AS1P0CW21 52 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 FHITP49789 147 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 UBE2G2P60604 165 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 GNG5P63218 68 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 ZFP69Q49AA0 526 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 C1orf134Q5TEV5 83 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 GFI1BQ5VTD9 330 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 EIF5AL1Q6IS14 154 aaKnown RBP4.38□□□□□ -1.71
RPA3-204ENST00000406109 GOLT1AQ6ZVE7 132 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 TMEM256Q8N2U0 113 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 SUN5Q8TC36 379 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 TMED6Q8WW62 240 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 ODF3Q96PU9 254 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 NIPSNAP3BQ9BS92 247 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 SCRT2Q9NQ03 307 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 ZNF492Q9P255 531 aa4.38□□□□□ -1.71
RPA3-204ENST00000406109 C7orf71A4D174 169 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 MAP1LC3B2A6NCE7 125 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 H7BYZ3 331 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 IFNA7P01567 189 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 TAS2R60P59551 318 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 BTN1A1Q13410 526 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 DPPA3Q6W0C5 159 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 ARL6IP6Q8N6S5 226 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 Q8TAT8 98 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 C20orf144Q9BQM9 153 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 MAP1LC3BQ9GZQ8 125 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
RPA3-204ENST00000406109 YTHDF2Q9Y5A9 579 aaKnown RBP4.37□□□□□ -1.71
RPA3-204ENST00000406109 TRAV8-1A0A0A6YYK1 113 aa4.36□□□□□ -1.71
RPA3-204ENST00000406109 A0A1W2PRE2 83 aa4.36□□□□□ -1.71
RPA3-204ENST00000406109 CBY3A6NI87 242 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms