RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
TOM1-203ENST00000404284 SPATA25Q9BR10 227 aa12.13□□□□□ -0.47
TOM1-203ENST00000404284 ATRXP46100 2492 aa12.13□□□□□ -0.47
TOM1-203ENST00000404284 J3QR89 54 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 UCNP55089 124 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 KLK9Q2XQG4 91 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 SH2D6Q7Z4S9 175 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 KLK9Q9UKQ9 250 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 ATP6V0E1O15342 81 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 NPYP01303 97 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 ECSCRQ19T08 205 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 SPAG8Q99932 426 aaPredicted RBP12.12□□□□□ -0.47
TOM1-203ENST00000404284 MED13LQ71F56 2210 aa12.12□□□□□ -0.47
TOM1-203ENST00000404284 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 SRSF2Q01130 221 aaKnown RBP12.11□□□□□ -0.47
TOM1-203ENST00000404284 TWIST1Q15672 202 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 OR8A1Q8NGG7 326 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
TOM1-203ENST00000404284 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 BUB3O43684 328 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
TOM1-203ENST00000404284 ASH1LQ9NR48 2969 aaKnown RBP12.1□□□□□ -0.47
TOM1-203ENST00000404284 GATA3P23771 443 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 UBE2E1P51965 193 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 ERCC8Q13216 396 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 FOXI2Q6ZQN5 318 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 CCDC140Q96MF4 163 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 CNFNQ9BYD5 112 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 SS18L2Q9UHA2 77 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 CLPSL1A2RUU4 121 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 CLEC3BP05452 202 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 SMIM13P0DJ93 91 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 FXYD7P58549 80 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 ETDBQ3ZM63 59 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 BOD1L2Q8IYS8 172 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
TOM1-203ENST00000404284 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
TOM1-203ENST00000404284 HBDP02042 147 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 CKS2P33552 79 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 SAA4P35542 130 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 RNF185Q96GF1 192 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 SVEP1Q4LDE5 3571 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 RNF182Q8N6D2 247 aa12.09□□□□□ -0.47
TOM1-203ENST00000404284 ORM1P02763 201 aa12.08□□□□□ -0.47
TOM1-203ENST00000404284 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
TOM1-203ENST00000404284 G3V318 75 aa12.08□□□□□ -0.48
TOM1-203ENST00000404284 K7ERJ3 54 aa12.08□□□□□ -0.48
TOM1-203ENST00000404284 LINC01559Q495D7 138 aa12.08□□□□□ -0.48
TOM1-203ENST00000404284 DPF1Q92782 380 aa12.08□□□□□ -0.48
TOM1-203ENST00000404284 LINC01548A6NM66 108 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 GCSHP23434 173 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 INSL3P51460 131 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 CACNG7P62955 275 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 SHISA2Q6UWI4 295 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 MTURNQ8N3F0 131 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 RBAKDNA6NC62 111 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 CLEC19AQ6UXS0 136 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 IL17RELQ6ZVW7 336 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 OR9G4Q8NGQ1 327 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 MRPL16Q9NX20 251 aaKnown RBP12.07□□□□□ -0.48
TOM1-203ENST00000404284 COL6A6A6NMZ7 2263 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 NMUP48645 174 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 SLC50A1Q9BRV3 221 aa12.07□□□□□ -0.48
TOM1-203ENST00000404284 SPTBN1Q01082 2364 aaKnown RBP12.06□□□□□ -0.48
TOM1-203ENST00000404284 LMO4P61968 165 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 UBTD1Q9HAC8 227 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 CACNA1BQ00975 2339 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 CENPVL3A0A0U1RRI6 287 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 TSPAN13O95857 204 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 FXYD2P54710 66 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 IFI27L1Q96BM0 104 aa12.06□□□□□ -0.48
TOM1-203ENST00000404284 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 EFNA4P52798 201 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 BPESC1Q9GZL8 116 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 TRAV8-2A0A0B4J237 113 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 LINC01546A6NGU7 62 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 C11orf21Q9P2W6 132 aa12.05□□□□□ -0.48
TOM1-203ENST00000404284 HIVEP3Q5T1R4 2406 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 IGKV3D-20A0A0C4DH25 116 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 F8W1H4 67 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 H3BMG7 143 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 RNF183Q96D59 192 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 PGPEP1Q9NXJ5 209 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 K7EMI3 77 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 PPIFP30405 207 aaKnown RBP12.04□□□□□ -0.48
TOM1-203ENST00000404284 C20orf78Q9BR46 151 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 MAP1LC3AQ9H492 121 aa12.04□□□□□ -0.48
TOM1-203ENST00000404284 NPFFO15130 113 aa12.03□□□□□ -0.48
TOM1-203ENST00000404284 SIVA1O15304 175 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms