RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 GAGE2AQ6NT46 116 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 C1orf122Q6ZSJ8 110 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 TSSC4Q9Y5U2 329 aaPredicted RBP13.2□□□□□ -0.3
TSC2-204ENST00000401874 K7EMI3 77 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 FAM120AOSQ5T036 256 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 UNQ6494/PRO21346Q6UXR6 183 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 C17orf77Q96MU5 243 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 H3BUA1 57 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
TSC2-204ENST00000401874 INAFM2P0DMQ5 153 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
TSC2-204ENST00000401874 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 ETDBQ3ZM63 59 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 CTSZQ9UBR2 303 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 YLPM1P49750 1951 aaKnown RBP13.19□□□□□ -0.3
TSC2-204ENST00000401874 PRO1854Q9UHT4 67 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 DENND4CQ5VZ89 1909 aa13.19□□□□□ -0.3
TSC2-204ENST00000401874 LENEPQ9Y5L5 61 aa13.18□□□□□ -0.3
TSC2-204ENST00000401874 DOCK11Q5JSL3 2073 aa13.18□□□□□ -0.3
TSC2-204ENST00000401874 IGF2BP2-AS1Q96M15 143 aa13.18□□□□□ -0.3
TSC2-204ENST00000401874 EGR2P11161 476 aaPredicted RBP13.18□□□□□ -0.3
TSC2-204ENST00000401874 GP9P14770 177 aa13.18□□□□□ -0.3
TSC2-204ENST00000401874 ZNF493Q6ZR52 646 aa13.18□□□□□ -0.3
TSC2-204ENST00000401874 NOTCH4Q99466 2003 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 TRBV25-1A0A075B6N4 114 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 DYNAPQ8N1N2 210 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 XCL2Q9UBD3 114 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 FGF6P10767 208 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 GAGE12JA6NER3 117 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 GAGE4Q13068 117 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 GAGE5Q13069 117 aa13.17□□□□□ -0.3
TSC2-204ENST00000401874 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
TSC2-204ENST00000401874 SHISA9B4DS77 424 aa13.16□□□□□ -0.3
TSC2-204ENST00000401874 DOCK8Q8NF50 2099 aa13.16□□□□□ -0.3
TSC2-204ENST00000401874 J3QQQ9 107 aa13.16□□□□□ -0.3
TSC2-204ENST00000401874 ZNF625Q96I27 306 aaPredicted RBP13.16□□□□□ -0.3
TSC2-204ENST00000401874 C22orf46C9J442 243 aa13.16□□□□□ -0.3
TSC2-204ENST00000401874 IGFL2Q6UWQ7 119 aa13.16□□□□□ -0.3
TSC2-204ENST00000401874 AZU1P20160 251 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 DEFB125Q8N687 156 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 AGPAT4-IT1Q9H0P7 198 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 ZNF407Q9C0G0 2248 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 PIP4P1Q86T03 277 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 SPANXDQ9BXN6 97 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 TRAV12-2A0A075B6T6 113 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 J3QLI3 93 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 HOXB4P17483 251 aaPredicted RBP13.15□□□□□ -0.3
TSC2-204ENST00000401874 C12orf74Q32Q52 190 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 TCTEX1D4Q5JR98 221 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 CFHR4Q92496 578 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 EP300Q09472 2414 aaPredicted RBP13.15□□□□□ -0.3
TSC2-204ENST00000401874 K7ERJ3 54 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 RNF114Q9Y508 228 aa13.15□□□□□ -0.3
TSC2-204ENST00000401874 MYO7BQ6PIF6 2116 aa13.15□□□□□ -0.31
TSC2-204ENST00000401874 VWC2LB2RUY7 222 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 NUPR1O60356 82 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 DEFB130BP0DP73 79 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 DEFB130AP0DP74 79 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 IGHV3-16A0A0C4DH30 117 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 I3L2K1 104 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 HLA-DMBP28068 263 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 EDA2RQ9HAV5 297 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 NPBQ8NG41 125 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 C11orf1Q9H5F2 150 aa13.14□□□□□ -0.31
TSC2-204ENST00000401874 SOCS3O14543 225 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 RHOHQ15669 191 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 ATP6V0BQ99437 205 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 PATE2Q6UY27 113 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 UTF1Q5T230 341 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 AKAP6Q13023 2319 aa13.13□□□□□ -0.31
TSC2-204ENST00000401874 GAGE12HA6NDE8 117 aa13.12□□□□□ -0.31
TSC2-204ENST00000401874 H3BMG7 143 aa13.12□□□□□ -0.31
TSC2-204ENST00000401874 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
TSC2-204ENST00000401874 PRSS29PA6NIE9 313 aa13.12□□□□□ -0.31
TSC2-204ENST00000401874 ELANEP08246 267 aa13.12□□□□□ -0.31
TSC2-204ENST00000401874 IGLV2-14P01704 120 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 HERVK_113P63121 156 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 INS-IGF2F8WCM5 200 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 INTS1Q8N201 2190 aaKnown RBP13.11□□□□□ -0.31
TSC2-204ENST00000401874 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 K7EIM0 57 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
TSC2-204ENST00000401874 FOXE3Q13461 319 aa13.1□□□□□ -0.31
TSC2-204ENST00000401874 ZNF48Q96MX3 618 aaPredicted RBP13.1□□□□□ -0.31
TSC2-204ENST00000401874 NCOR1O75376 2440 aa13.1□□□□□ -0.31
TSC2-204ENST00000401874 FOXI2Q6ZQN5 318 aa13.1□□□□□ -0.31
TSC2-204ENST00000401874 PCP2Q8IVA1 136 aa13.1□□□□□ -0.31
TSC2-204ENST00000401874 SCRT2Q9NQ03 307 aa13.1□□□□□ -0.31
TSC2-204ENST00000401874 IGHV3-38A0A0C4DH36 116 aa13.09□□□□□ -0.31
TSC2-204ENST00000401874 IGKV1-17P01599 117 aa13.09□□□□□ -0.31
TSC2-204ENST00000401874 IGLV11-55A0A075B6I3 123 aa13.09□□□□□ -0.31
TSC2-204ENST00000401874 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
TSC2-204ENST00000401874 ROS1P08922 2347 aa13.08□□□□□ -0.31
TSC2-204ENST00000401874 SP5Q6BEB4 398 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms