RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 EYSQ5T1H1 3165 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 MRPL18Q9H0U6 180 aaKnown RBP4.53□□□□□ -1.68
PTPRD-206ENST00000397617 LOC102724200A0A096LPH7 203 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-206ENST00000397617 ALKBH7Q9BT30 221 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-206ENST00000397617 ST20Q9HBF5 79 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 C7orf71A4D174 169 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
PTPRD-206ENST00000397617 RRN3P1Q2M238 152 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 DERL1Q9BUN8 251 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 TRAV21A0A0B4J279 112 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 OR4C46A6NHA9 309 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 TWIST1Q15672 202 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 EBLN2Q6P2I7 272 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 SCGB1D4Q6XE38 83 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 OR5A1Q8NGJ0 315 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 PRELID3AQ96N28 172 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 MS4A10Q96PG2 267 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 C20orf78Q9BR46 151 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 H3BUX3 64 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 PYYP10082 97 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 ZNF843Q8N446 348 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 MRAP2Q96G30 205 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 LINC00467Q9BRT7 94 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 U3KQK5 164 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 TRAV40A0A0B4J280 105 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 H7C1H1 209 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 TRGV3P03979 118 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 PYY3Q5JQD4 70 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 TEX43Q6ZNM6 134 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 GOLT1AQ6ZVE7 132 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-206ENST00000397617 IGHV7-4-1A0A0J9YVY3 117 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 LINC01546A6NGU7 62 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 K7EN84 100 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 SPINK9Q5DT21 86 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 Q6YL49 198 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 C18orf32Q8TCD1 76 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 BLNKQ8WV28 456 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 EIF3GO75821 320 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPRD-206ENST00000397617 APOHP02749 345 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-206ENST00000397617 NUP35Q8NFH5 326 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 KLLNB2CW77 178 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 NMUP48645 174 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 RAX2Q96IS3 184 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 MS4A6AQ9H2W1 248 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
PTPRD-206ENST00000397617 FAM104BQ5XKR9 115 aa4.52□□□□□ -1.69
PTPRD-206ENST00000397617 APCSP02743 223 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 NDUFA7O95182 113 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 GPR183P32249 361 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 SPAG8Q99932 426 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-206ENST00000397617 C19orf84I3L1E1 186 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 RHODO00212 210 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 DLEU1O43261 78 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 IL17RELQ6ZVW7 336 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 POM121L12Q8N7R1 296 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 IGHV4-30-2A0A087WSY4 118 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 J3QKU1 62 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 FABP2P12104 132 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 GAGE1Q13065 139 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 PEMTQ9UBM1 199 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 CELSR2Q9HCU4 2923 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
PTPRD-206ENST00000397617 GATA2P23769 480 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-206ENST00000397617 DDTP30046 118 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 LCN12Q6JVE5 192 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 GZMBP10144 247 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 DYNAPQ8N1N2 210 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 OR8A1Q8NGG7 326 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 ATP5LO75964 103 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 PRSS1P07477 247 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 NACAE9PAV3 2078 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 CLPSL1A2RUU4 121 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 TMEM189A5PLL7 270 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 SRSF9Q13242 221 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPRD-206ENST00000397617 TMEM256Q8N2U0 113 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 SOCS3O14543 225 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 TGFAP01135 160 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 HLA-DRB4P13762 266 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 PCP4P48539 62 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 PSMB2P49721 201 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 HLA-DRB4X5D2U9 266 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 TENM4Q6N022 2769 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 FAM19A4Q96LR4 140 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 SPANXB1Q9NS25 103 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-206ENST00000397617 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 K7EQG2 157 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 NDUFS7O75251 213 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 CBLN1P23435 193 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 MORN3Q6PF18 240 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-206ENST00000397617 FER1L6-AS1Q8NA97 138 aa4.5□□□□□ -1.69
PTPRD-206ENST00000397617 ZNF418Q8TF45 676 aaPredicted RBP4.5□□□□□ -1.69
PTPRD-206ENST00000397617 ORMDL2Q53FV1 153 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
PTPRD-206ENST00000397617 INSL3P51460 131 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms