RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 ATP5G2Q06055 141 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 FAM78AQ5JUQ0 283 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 SLC25A42Q86VD7 318 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 OR5H2Q8NGV7 314 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 OR4K13Q8NH42 304 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 PPP1R1CQ8WVI7 109 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
SMCO1-201ENST00000397537 CHAC1Q9BUX1 264 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 AICDAQ9GZX7 198 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 ZNF581Q9P0T4 197 aa4.86□□□□□ -1.63
SMCO1-201ENST00000397537 IGHV1-45A0A0A0MS14 117 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 KRTAP16-1A8MUX0 517 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 CCL16O15467 120 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 NAPSAO96009 420 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 IGKV1-39P01597 117 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 IGKV1D-39P04432 117 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 ZNF823P16415 610 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 KRTDAPP60985 99 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 SNRPGP62308 76 aaKnown RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 ZNF322Q6U7Q0 402 aaPredicted RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 KTN1-AS1Q86SY8 53 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 PDPNQ86YL7 162 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 C10orf126Q8N4M7 172 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 Q8N976 141 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 OR4X2Q8NGF9 303 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 GTSF1Q8WW33 167 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 RBMXL1Q96E39 390 aaKnown RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 BORCS8Q96FH0 119 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 RTL8AQ9BWD3 113 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 NMES1Q9C002 83 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 IMUPQ9GZP8 106 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 FGF23Q9GZV9 251 aaPredicted RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 C6orf106Q9H6K1 298 aaPredicted RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 FGF22Q9HCT0 170 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 TP73-AS1Q9UF72 201 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 TAC3Q9UHF0 121 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 TNRC6AQ8NDV7 1962 aaKnown RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 ANKHD1Q8IWZ3 2542 aaKnown RBP4.85□□□□□ -1.63
SMCO1-201ENST00000397537 NBEAL1Q6ZS30 2694 aa4.85□□□□□ -1.63
SMCO1-201ENST00000397537 SVILO95425 2214 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 IGKV1D-43A0A0B4J1Z2 117 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 H3BUT2 72 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 UQCRQO14949 82 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 ACVRL1P37023 503 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 INSL3P51460 131 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 GNB2P62879 340 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 SSBP1Q04837 148 aaKnown RBP4.84□□□□□ -1.63
SMCO1-201ENST00000397537 ATOH7Q8N100 152 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 AQP3Q92482 292 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 CST11Q9H112 138 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 MANBALQ9NQG1 85 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 OTORQ9NRC9 128 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 DEC1Q9P2X7 70 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 MED13LQ71F56 2210 aa4.84□□□□□ -1.63
SMCO1-201ENST00000397537 CABIN1Q9Y6J0 2220 aa4.84□□□□□ -1.64
SMCO1-201ENST00000397537 IGKV1-6A0A0C4DH72 117 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 H3BMG7 143 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 SLC25A5P05141 298 aaKnown RBP4.83□□□□□ -1.64
SMCO1-201ENST00000397537 NMUP48645 174 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 RTL8BQ17RB0 113 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 Q8N1X5 172 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 SLC25A29Q8N8R3 303 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 OR2T10Q8NGZ9 312 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 NAA60Q9H7X0 242 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 DENND4CQ5VZ89 1909 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 MED13Q9UHV7 2174 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 TRAV9-1A0A075B6T8 112 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 NOVP48745 357 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 PLGLB1Q02325 96 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF90Q03938 601 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 SP6Q3SY56 376 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 VMA21Q3ZAQ7 101 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 C3orf22Q8N5N4 141 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 OTOSQ8NHW6 89 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF799Q96GE5 643 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 TRAPPC1Q9Y5R8 145 aa4.83□□□□□ -1.64
SMCO1-201ENST00000397537 IGKV1-12A0A0C4DH73 117 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 EPM2AB3EWF7 344 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 SYS1-DBNDD2H3BUS1 97 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 IGKV1D-12P01611 117 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 PSMB8P28062 276 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 GPHB5Q86YW7 130 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 CYB561D1Q8N8Q1 229 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 LINC00526Q96FQ7 95 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 CSAG2Q9Y5P2 127 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 CHCHD2Q9Y6H1 151 aaPredicted RBP4.82□□□□□ -1.64
SMCO1-201ENST00000397537 BSNQ9UPA5 3926 aa4.82□□□□□ -1.64
SMCO1-201ENST00000397537 LY6G6DO95868 133 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 CRISP2P16562 243 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
SMCO1-201ENST00000397537 ZNF876PQ49A33 203 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 RPS19BP1Q86WX3 136 aaKnown RBP4.81□□□□□ -1.64
SMCO1-201ENST00000397537 TMEM256Q8N2U0 113 aa4.81□□□□□ -1.64
SMCO1-201ENST00000397537 PPDPFLQ8WWR9 84 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms