RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SGK494Q96LW2 274 aa18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 TIMM8BQ9Y5J9 83 aaPredicted RBP18.12■□□□□ 0.49
TSPAN4-207ENST00000397411 TRAV8-1A0A0A6YYK1 113 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 CBY3A6NI87 242 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 SNURFLB1AK76 121 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 IGLL5B9A064 214 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 PRR9Q5T870 116 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 CST9LP1Q5W188 147 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 TREM1Q9NP99 234 aa18.11■□□□□ 0.49
TSPAN4-207ENST00000397411 FAM74A7A6NL05 159 aa18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 DEFB130BP0DP73 79 aa18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 DEFB130AP0DP74 79 aa18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 RAB5CP51148 216 aa18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 EIF4E3Q8N5X7 224 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 CYB561D1Q8N8Q1 229 aa18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 NOP10Q9NPE3 64 aaKnown RBP18.1■□□□□ 0.49
TSPAN4-207ENST00000397411 HTN3P15516 51 aa18.09■□□□□ 0.49
TSPAN4-207ENST00000397411 RNASE8Q8TDE3 154 aaKnown RBP18.09■□□□□ 0.49
TSPAN4-207ENST00000397411 ATG101Q9BSB4 218 aa18.09■□□□□ 0.49
TSPAN4-207ENST00000397411 PSG8Q9UQ74 426 aa18.09■□□□□ 0.49
TSPAN4-207ENST00000397411 PPT1P50897 306 aa18.08■□□□□ 0.48
TSPAN4-207ENST00000397411 C9orf62Q8N4C0 152 aa18.08■□□□□ 0.48
TSPAN4-207ENST00000397411 IGHV1OR15-1A0A075B7D0 117 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 PLAC8L1A1L4L8 177 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 FBLL1A6NHQ2 334 aaKnown RBP18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 F6UZH7 168 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 PRNTQ86SH4 94 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 ZNF680Q8NEM1 530 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 LINC00467Q9BRT7 94 aa18.07■□□□□ 0.48
TSPAN4-207ENST00000397411 TEX46H3BTG2 121 aa18.06■□□□□ 0.48
TSPAN4-207ENST00000397411 FLI1Q01543 452 aaPredicted RBP18.06■□□□□ 0.48
TSPAN4-207ENST00000397411 TENM2Q9NT68 2774 aa18.06■□□□□ 0.48
TSPAN4-207ENST00000397411 LCE6AA0A183 80 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 PEX7O00628 323 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 PAGE4O60829 102 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 ANXA2RQ3ZCQ2 193 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 MUC21Q5SSG8 566 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 FAM159AQ6UWV7 190 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 Q6ZQT7 251 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 TMEM75Q8N9X5 138 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 HIST1H2BAQ96A08 127 aa18.05■□□□□ 0.48
TSPAN4-207ENST00000397411 SULT1A2P50226 295 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 TCTAP57738 103 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 Q6AWC8 147 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 TVP23CQ96ET8 276 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 GSN-AS1Q9NRJ2 163 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 NAGKQ9UJ70 344 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 CSMD3Q7Z407 3707 aa18.04■□□□□ 0.48
TSPAN4-207ENST00000397411 TRAV34A0A0B4J273 112 aa18.03■□□□□ 0.48
TSPAN4-207ENST00000397411 TRAV21A0A0B4J279 112 aa18.03■□□□□ 0.48
TSPAN4-207ENST00000397411 SAPCD1Q5SSQ6 148 aa18.03■□□□□ 0.48
TSPAN4-207ENST00000397411 LINC00479Q96M42 142 aa18.03■□□□□ 0.48
TSPAN4-207ENST00000397411 ARL2-SNX15V9GYD0 113 aa18.03■□□□□ 0.48
TSPAN4-207ENST00000397411 TP53TG3Q9ULZ0 132 aa18.02■□□□□ 0.48
TSPAN4-207ENST00000397411 STARD9Q9P2P6 4700 aa18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 IGHV4-4A0A075B6R2 117 aa18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 NKX2-5P52952 324 aaPredicted RBP18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 SMUG1Q53HV7 270 aa18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 C8orf49Q96NF6 230 aa18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 TCEAL7Q9BRU2 100 aa18.01■□□□□ 0.47
TSPAN4-207ENST00000397411 GAGE12BA1L429 117 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 GAGE7O76087 117 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 LY6G6CO95867 125 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 IGLV2-11P01706 119 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 GAGE12FP0CL80 117 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 GAGE12GP0CL81 117 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 GAGE12IP0CL82 117 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 ATP5G3P48201 142 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 UBE2G1P62253 170 aa18■□□□□ 0.47
TSPAN4-207ENST00000397411 DAZ2Q13117 558 aaKnown RBP18■□□□□ 0.47
TSPAN4-207ENST00000397411 ATP5G1P05496 136 aa17.99■□□□□ 0.47
TSPAN4-207ENST00000397411 ZNF415Q09FC8 603 aa17.99■□□□□ 0.47
TSPAN4-207ENST00000397411 NDUFAF3Q9BU61 184 aa17.99■□□□□ 0.47
TSPAN4-207ENST00000397411 GNG13Q9P2W3 67 aa17.99■□□□□ 0.47
TSPAN4-207ENST00000397411 TRGV11A0A075B6L2 103 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 F5H768 121 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 GCGP01275 180 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 TMEM183BQ1AE95 376 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 IBA57Q5T440 356 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 TMEM183AQ8IXX5 376 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 C11orf72Q8NBR9 251 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 APLNQ9ULZ1 77 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 KLF12Q9Y4X4 402 aa17.98■□□□□ 0.47
TSPAN4-207ENST00000397411 TRGV1A0A0A0MS02 117 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 TRAV1-1A0A0B4J248 108 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 AKR1C3P42330 323 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 FMC1Q96HJ9 113 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 FAM210BQ96KR6 192 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 MANBALQ9NQG1 85 aa17.97■□□□□ 0.47
TSPAN4-207ENST00000397411 TCL1AP56279 114 aa17.96■□□□□ 0.47
TSPAN4-207ENST00000397411 CCL20P78556 96 aa17.96■□□□□ 0.47
TSPAN4-207ENST00000397411 KCNS1Q96KK3 526 aa17.96■□□□□ 0.47
TSPAN4-207ENST00000397411 SDF2L1Q9HCN8 221 aa17.96■□□□□ 0.47
TSPAN4-207ENST00000397411 TRGV2A0A075B6R0 118 aa17.95■□□□□ 0.46
TSPAN4-207ENST00000397411 Q6ZTI0 123 aa17.95■□□□□ 0.46
TSPAN4-207ENST00000397411 LINC00476Q8WZB0 136 aa17.95■□□□□ 0.46
TSPAN4-207ENST00000397411 ZFP30Q9Y2G7 519 aa17.95■□□□□ 0.46
TSPAN4-207ENST00000397411 IFNA1P01562 189 aa17.94■□□□□ 0.46
TSPAN4-207ENST00000397411 ZNF80P51504 273 aaPredicted RBP17.94■□□□□ 0.46
TSPAN4-207ENST00000397411 ALKAL2Q6UX46 152 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms