RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 WDR73Q6P4I2 378 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 UNQ9165/PRO28630Q6UXU0 137 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 GBGT1Q8N5D6 347 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 DLX4Q92988 240 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 NAT8BQ9UHF3 227 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 TENM2Q9NT68 2774 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 CHEK1O14757 476 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 P01737 135 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 SLURP1P55000 103 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 TMEM136Q6ZRR5 245 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 SBSPONQ8IVN8 264 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 GLMPQ8WWB7 406 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 ZC2HC1AQ96GY0 325 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 MRPL18Q9H0U6 180 aaKnown RBP13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
TNFSF13-205ENST00000396545 DYNC2H1Q8NCM8 4307 aaKnown RBP13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 A8MWL6 223 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 A8MWP6 167 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 SNURFLB1AK76 121 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 LINC01619G3V211 115 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 SAP30O75446 220 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 MRPL53Q96EL3 112 aaKnown RBP13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 NEU1Q99519 415 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 GFRA4Q9GZZ7 299 aa13.1□□□□□ -0.31
TNFSF13-205ENST00000396545 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 FAM231BA6NCW3 169 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 SMIM6P0DI80 62 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 MUC7Q8TAX7 377 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 RCHY1Q96PM5 261 aa13.09□□□□□ -0.31
TNFSF13-205ENST00000396545 RYR2Q92736 4967 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 A0A087WW49 117 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 HLA-DMBP28068 263 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 SMPXQ9UHP9 88 aa13.08□□□□□ -0.32
TNFSF13-205ENST00000396545 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 HIGD1CA8MV81 97 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 SPINK4O60575 86 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 KLF5Q13887 457 aaPredicted RBP13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 SAMD13Q5VXD3 122 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 MRPL54Q6P161 138 aaKnown RBP13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 IGHV3OR16-13A0A075B7E8 117 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 IGHV3-49A0A0A0MS15 119 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 IGHV3-74A0A0B4J1X5 117 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 TRAV8-2A0A0B4J237 113 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 A0A1B0GXF2 115 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 CRIP1P50238 77 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 SAPCD1Q5SSQ6 148 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 IGFL4Q6B9Z1 124 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 GTSF1Q8WW33 167 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 C12orf57Q99622 126 aa13.07□□□□□ -0.32
TNFSF13-205ENST00000396545 S100A2P29034 98 aa13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 FOXA3P55318 350 aaPredicted RBP13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 C8orf49Q96NF6 230 aa13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 RHPN1-AS1Q9BWJ2 59 aa13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 CSMD3Q7Z407 3707 aa13.06□□□□□ -0.32
TNFSF13-205ENST00000396545 PDZD11Q5EBL8 140 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 TCF24Q7RTU0 167 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 OR2D3Q8NGH3 330 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 HIST1H2BLQ99880 126 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 VGLL1Q99990 258 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 PEMTQ9UBM1 199 aa13.05□□□□□ -0.32
TNFSF13-205ENST00000396545 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 PRB4P10163 310 aaPredicted RBP13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 SYNJ2BPP57105 145 aa13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
TNFSF13-205ENST00000396545 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 SACSQ9NZJ4 4579 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 LYSTQ99698 3801 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 PRAC2D3DTV9 90 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 Q0VG73 95 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
TNFSF13-205ENST00000396545 SOCS3O14543 225 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 AMBPP02760 352 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 FABP4P15090 132 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 CRISP2P16562 243 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 OR10D4PQ8NGN7 298 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 ZMAT4Q9H898 229 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 NRN1Q9NPD7 142 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 TP53TG3Q9ULZ0 132 aa13.02□□□□□ -0.33
TNFSF13-205ENST00000396545 SH2D1AO60880 128 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 IGLV1-51P01701 117 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 APCSP02743 223 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 RAB4BP61018 213 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 HBBP68871 147 aa13.01□□□□□ -0.33
TNFSF13-205ENST00000396545 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms