RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 BTN1A1Q13410 526 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 FHL2Q14192 279 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 MIC13Q5XKP0 118 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 TMEM70Q9BUB7 260 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 WDR83OSQ9Y284 106 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 TNFRSF18Q9Y5U5 241 aa11.88□□□□□ -0.51
EXOSC3-202ENST00000396521 SRIP30626 198 aa11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 S100A11P31949 105 aa11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 ERCC8Q13216 396 aa11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 STX12Q86Y82 276 aa11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 PCNPQ8WW12 178 aaKnown RBP11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 C8orf49Q96NF6 230 aa11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 FLG2Q5D862 2391 aaPredicted RBP11.87□□□□□ -0.51
EXOSC3-202ENST00000396521 MYCBP2O75592 4640 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 IGHV3-53P01767 116 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 VWC2Q2TAL6 325 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 Q6ZSN1 163 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 PPP1R1CQ8WVI7 109 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
EXOSC3-202ENST00000396521 NDUFB4O95168 129 aa11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 HBG1P69891 147 aa11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 HBG2P69892 147 aa11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 IL15RAQ13261 267 aa11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 ZFAND2AQ8N6M9 145 aa11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 LYRM2Q9NU23 88 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 MRPL16Q9NX20 251 aaKnown RBP11.85□□□□□ -0.51
EXOSC3-202ENST00000396521 E5RGE8 158 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 K7EQD1 137 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 ATP6V1FQ16864 119 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 OR10G4Q8NGN3 311 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 ASB13Q8WXK3 278 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 SPXQ9BT56 116 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 ZNF492Q9P255 531 aa11.84□□□□□ -0.51
EXOSC3-202ENST00000396521 C9JCJ5 164 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 CST7O76096 145 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 MPC2O95563 127 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 SMR3BP02814 79 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 CRYGDP07320 174 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 GIPP09681 153 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 SULT1A1P50225 295 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 ZNF138P52744 262 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 BAXQ07812 192 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 RASL10AQ92737 203 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 OR5AC2Q9NZP5 309 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 MBD2Q9UBB5 411 aa11.83□□□□□ -0.52
EXOSC3-202ENST00000396521 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 FAM24AA6NFZ4 105 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 PSCAO43653 123 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 TIRAPP58753 221 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 EXOC3-AS1Q8N2X6 119 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 THAP6Q8TBB0 222 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 TP53TG3Q9ULZ0 132 aa11.82□□□□□ -0.52
EXOSC3-202ENST00000396521 IGSF23A1L1A6 192 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 J3QL48 77 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 C1QBP02746 253 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 NBEAP1P0C6P0 100 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 GYPEP15421 78 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 WFDC10BQ8IUB3 73 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 BLNKQ8WV28 456 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 VPS13BQ7Z7G8 4022 aa11.81□□□□□ -0.52
EXOSC3-202ENST00000396521 UBE2L5PA0A1B0GUS4 154 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 CSN1S1P47710 185 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 ZNF266Q14584 549 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 TMEM252Q8N6L7 170 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 LENEPQ9Y5L5 61 aa11.8□□□□□ -0.52
EXOSC3-202ENST00000396521 TRGV11A0A075B6L2 103 aa11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 H0YIZ8 118 aa11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 PYYP10082 97 aa11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 FAM122CQ6P4D5 195 aa11.79□□□□□ -0.52
EXOSC3-202ENST00000396521 IGHV3-38A0A0C4DH36 116 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 FGF7P21781 194 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 PRR9Q5T870 116 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 FAM159AQ6UWV7 190 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 OR2T35Q8NGX2 323 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 OR51M1Q9H341 326 aa11.78□□□□□ -0.52
EXOSC3-202ENST00000396521 hCG_2014768A0A024R1R8 64 aa11.77□□□□□ -0.53
EXOSC3-202ENST00000396521 TRAV4A0A0B4J268 109 aa11.77□□□□□ -0.53
EXOSC3-202ENST00000396521 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
EXOSC3-202ENST00000396521 KCNIP2Q9NS61 270 aa11.77□□□□□ -0.53
EXOSC3-202ENST00000396521 FXYD6-FXYD2A0A087WZ82 144 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 LRCOL1A6NCL2 159 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 PLA2G1BP04054 148 aaKnown RBP11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 SFTA3P0C7M3 94 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 LINC01556Q5JQF7 62 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 Q6AWC8 147 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms