RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PYY3Q5JQD4 70 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 FOXI2Q6ZQN5 318 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 DOCK7Q96N67 2140 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 CACNA1GO43497 2377 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 TSC2P49815 1807 aa8.23□□□□□ -1.09
COL4A6-203ENST00000394872 SOCS3O14543 225 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 ATP6V0BQ99437 205 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 A0A1B0GUS0 222 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 H3BMM0 161 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 DIDO1Q9BTC0 2240 aaKnown RBP8.22□□□□□ -1.09
COL4A6-203ENST00000394872 WT1P19544 449 aaPredicted RBP8.22□□□□□ -1.09
COL4A6-203ENST00000394872 VOPP1Q96AW1 172 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 PLXND1Q9Y4D7 1925 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 Q0VG73 95 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 ZNF524Q96C55 264 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 MRPL53Q96EL3 112 aaKnown RBP8.22□□□□□ -1.09
COL4A6-203ENST00000394872 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
COL4A6-203ENST00000394872 IGHV4-30-2A0A087WSY4 118 aa8.21□□□□□ -1.09
COL4A6-203ENST00000394872 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.09
COL4A6-203ENST00000394872 DKK4Q9UBT3 224 aa8.21□□□□□ -1.09
COL4A6-203ENST00000394872 ADAMTSL5Q6ZMM2 481 aa8.21□□□□□ -1.09
COL4A6-203ENST00000394872 IGLV2-23P01705 113 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 IGLC1P0CG04 106 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 RHOHQ15669 191 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 PRSS57Q6UWY2 283 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 ACACAQ13085 2346 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 IGHV4-61A0A0C4DH41 118 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 GVINP1Q7Z2Y8 2422 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 TAL2Q16559 108 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 ZC2HC1AQ96GY0 325 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 IGHV4-38-2P0DP08 117 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 ZNF664Q8N3J9 261 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 Q9HAA7 133 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 CTSZQ9UBR2 303 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 U3KQE9 123 aa8.21□□□□□ -1.1
COL4A6-203ENST00000394872 SLURP1P55000 103 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 UBE2BP63146 152 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 IGFBPL1Q8WX77 278 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 SPTBN2O15020 2390 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 ADCYAP1P18509 176 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
COL4A6-203ENST00000394872 UBE2WQ96B02 151 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 F6UB75 175 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 PLXNA2O75051 1894 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 CD5LO43866 347 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 Q6ZQT7 251 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 SMIM27A0A1W2PRY6 76 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 APRG1Q8IVJ8 170 aa8.2□□□□□ -1.1
COL4A6-203ENST00000394872 HERVK_113P63121 156 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 SRSF2Q01130 221 aaKnown RBP8.19□□□□□ -1.1
COL4A6-203ENST00000394872 RSPO1Q2MKA7 263 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-203ENST00000394872 C1orf147Q96MC9 270 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-203ENST00000394872 NDUFA12Q9UI09 145 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 ZNF726P1Q15940 193 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 FXYD5Q96DB9 178 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 KLF2Q9Y5W3 355 aaPredicted RBP8.19□□□□□ -1.1
COL4A6-203ENST00000394872 GP9P14770 177 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 FOXE3Q13461 319 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 MYLKQ15746 1914 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 HLA-DMBP28068 263 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 XCL1P47992 114 aa8.19□□□□□ -1.1
COL4A6-203ENST00000394872 GNRH2O43555 120 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 V9GYV3 84 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 NLRC5Q86WI3 1866 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 CENPVL3A0A0U1RRI6 287 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 CRLF1O75462 422 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 ZNF491Q8N8L2 437 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 C8orf31Q8N9H6 132 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 PIFOQ8TCI5 191 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 NRGNQ92686 78 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 SPRNQ5BIV9 151 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 ARTNQ5T4W7 220 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 ASPHD1Q5U4P2 390 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 SIGLEC8Q9NYZ4 499 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 OR11H6Q8NGC7 330 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 DSCR8Q96T75 97 aa8.18□□□□□ -1.1
COL4A6-203ENST00000394872 ARFGEF3Q5TH69 2177 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 SMIM2Q9BVW6 85 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 A8MWP6 167 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 PYGO2Q9BRQ0 406 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 C9JQL5 133 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 DYNAPQ8N1N2 210 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 NPYP01303 97 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 SPANXA1Q9NS26 97 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 IGFL2Q6UWQ7 119 aa8.17□□□□□ -1.1
COL4A6-203ENST00000394872 SPTBN1Q01082 2364 aaKnown RBP8.16□□□□□ -1.1
COL4A6-203ENST00000394872 TRAV13-2A0A0B4J235 113 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 POLR3KQ9Y2Y1 108 aaPredicted RBP8.16□□□□□ -1.1
COL4A6-203ENST00000394872 RPL18AQ02543 176 aaKnown RBP8.16□□□□□ -1.1
COL4A6-203ENST00000394872 IGLC7A0M8Q6 106 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 IGF2-ASQ6U949 168 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 USF3Q68DE3 2245 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 ZNF407Q9C0G0 2248 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 FGF6P10767 208 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 ADORA2A-AS1P86434 159 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms