RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 A0A0G2JLM5 398 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 J3QLI3 93 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 IGHV3-11P01762 117 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 SPATA12Q7Z6I5 190 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 GPHB5Q86YW7 130 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 ORMDL3Q8N138 153 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 OR4X2Q8NGF9 303 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 MUC21A0A0G2JKD1 596 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 MUC21A0A140T8X8 626 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 TWIST1Q15672 202 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 MUC21Q5SSG8 566 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 LINC00173Q6ZV60 143 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 ATOH7Q8N100 152 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 NPFFR1Q9GZQ6 430 aa14.19□□□□□ -0.14
SIL1-202ENST00000394817 SYS1-DBNDD2H3BUS1 97 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 IGLC3P0DOY3 106 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 SSTP61278 116 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 MRPL51Q4U2R6 128 aaKnown RBP14.18□□□□□ -0.14
SIL1-202ENST00000394817 KLHDC1Q8N7A1 406 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 PRELID3AQ96N28 172 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 TMEM191AQ9H0A3 160 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 CSPG4Q6UVK1 2322 aa14.18□□□□□ -0.14
SIL1-202ENST00000394817 TRAV9-2A0A087WT02 112 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 C20orf202A1L168 122 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 SOCS3O14543 225 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 LOXL1Q08397 574 aaPredicted RBP14.17□□□□□ -0.14
SIL1-202ENST00000394817 DEFB112Q30KQ8 113 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 FA2HQ7L5A8 372 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 LRRC75A-AS1Q8N1F1 130 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 HSPB8Q9UJY1 196 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 LENEPQ9Y5L5 61 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 IGKV3D-20A0A0C4DH25 116 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 TGFAP01135 160 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 KRTAP1-3Q8IUG1 177 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 PRSS3P2Q8NHM4 247 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 C20orf173Q96LM9 149 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 UQCR10Q9UDW1 63 aa14.17□□□□□ -0.14
SIL1-202ENST00000394817 IGHV4-59P01825 116 aa14.16□□□□□ -0.14
SIL1-202ENST00000394817 LCNL1Q6ZST4 164 aa14.16□□□□□ -0.14
SIL1-202ENST00000394817 ZNF738Q8NE65 137 aa14.16□□□□□ -0.14
SIL1-202ENST00000394817 C11orf21Q9P2W6 132 aa14.16□□□□□ -0.14
SIL1-202ENST00000394817 IGHV4-31P0DP07 118 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 MAJINQ3KP22 176 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 Q96MF0 132 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 MAP1LC3CQ9BXW4 147 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 SIGLEC8Q9NYZ4 499 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 ZMAT5Q9UDW3 170 aaKnown RBP14.15□□□□□ -0.14
SIL1-202ENST00000394817 IFI27P40305 119 aaPredicted RBP14.15□□□□□ -0.14
SIL1-202ENST00000394817 OR10AG1Q8NH19 301 aa14.15□□□□□ -0.14
SIL1-202ENST00000394817 OR4C46A6NHA9 309 aa14.14□□□□□ -0.15
SIL1-202ENST00000394817 PET117Q6UWS5 81 aa14.14□□□□□ -0.15
SIL1-202ENST00000394817 MSRB1Q9NZV6 116 aa14.14□□□□□ -0.15
SIL1-202ENST00000394817 GCN1Q92616 2671 aaKnown RBP14.14□□□□□ -0.15
SIL1-202ENST00000394817 IGHV7-4-1A0A0J9YVY3 117 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 PSMB8P28062 276 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 CKS2P33552 79 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 TMEM95Q3KNT9 176 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 RNF185Q96GF1 192 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 DAZ1Q9NQZ3 744 aaKnown RBP14.13□□□□□ -0.15
SIL1-202ENST00000394817 ZNF469Q96JG9 3925 aaPredicted RBP14.13□□□□□ -0.15
SIL1-202ENST00000394817 CREBBPQ92793 2442 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 OVOL1O14753 267 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 FOXE3Q13461 319 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 LINC00469Q8N7U9 141 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 LINC00477Q96M19 166 aa14.13□□□□□ -0.15
SIL1-202ENST00000394817 IGLL1P15814 213 aa14.12□□□□□ -0.15
SIL1-202ENST00000394817 NUTF2P61970 127 aaKnown RBP14.12□□□□□ -0.15
SIL1-202ENST00000394817 PEF1Q9UBV8 284 aaKnown RBP14.12□□□□□ -0.15
SIL1-202ENST00000394817 ITPR3Q14573 2671 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 A0A096LNJ9 63 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 FSHBP01225 129 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 NPYP01303 97 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 PPBPP02775 128 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 OR10J6PQ8NGY7 276 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 ZNF747Q9BV97 191 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 RHPN1-AS1Q9BWJ2 59 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 PRRC2AP48634 2157 aaKnown RBP14.11□□□□□ -0.15
SIL1-202ENST00000394817 LOC389332A0A1B0GUA5 103 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 TMEM89A2RUT3 159 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 FAM106AQ4KMX7 169 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 TM4SF20Q53R12 229 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 PRR9Q5T870 116 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 TEX15Q9BXT5 2789 aa14.11□□□□□ -0.15
SIL1-202ENST00000394817 SMKR1H3BMG3 65 aa14.1□□□□□ -0.15
SIL1-202ENST00000394817 K7EMT4 169 aa14.1□□□□□ -0.15
SIL1-202ENST00000394817 Q6ZN92 141 aa14.1□□□□□ -0.15
SIL1-202ENST00000394817 LAMTOR2Q9Y2Q5 125 aa14.1□□□□□ -0.15
SIL1-202ENST00000394817 PDZD2O15018 2839 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 NCR2O95944 276 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 LINC01545Q5VT33 79 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 PRSS57Q6UWY2 283 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 ZFAND2AQ8N6M9 145 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 SMPXQ9UHP9 88 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 SNAI2O43623 268 aa14.09□□□□□ -0.15
SIL1-202ENST00000394817 HNRNPA3P51991 378 aaKnown RBP14.09□□□□□ -0.15
SIL1-202ENST00000394817 TCF21O43680 179 aa14.08□□□□□ -0.16
SIL1-202ENST00000394817 RPL11P62913 178 aaKnown RBP14.08□□□□□ -0.16
SIL1-202ENST00000394817 Q6ZQT7 251 aa14.08□□□□□ -0.16
SIL1-202ENST00000394817 ST20Q9HBF5 79 aa14.08□□□□□ -0.16
SIL1-202ENST00000394817 VPREB3Q9UKI3 123 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms