RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 CYCSP99999 105 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 ST6GAL2Q96JF0 529 aa12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 ATP5SQ99766 215 aa12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 MRPL16Q9NX20 251 aaKnown RBP12.54□□□□□ -0.4
PDLIM7-205ENST00000393551 RGS13O14921 159 aa12.53□□□□□ -0.4
PDLIM7-205ENST00000393551 MPC2O95563 127 aa12.53□□□□□ -0.4
PDLIM7-205ENST00000393551 TTC32Q5I0X7 151 aa12.53□□□□□ -0.4
PDLIM7-205ENST00000393551 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
PDLIM7-205ENST00000393551 HSPB11Q9Y547 144 aa12.53□□□□□ -0.4
PDLIM7-205ENST00000393551 hCG_2014768A0A024R1R8 64 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 TRBV7-9A0A0J9YWB2 115 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 A0A1W2PPQ1 181 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 OR7C2O60412 319 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 IGHV3-53P01767 116 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 MED28Q9H204 178 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 WFDC1Q9HC57 220 aa12.52□□□□□ -0.41
PDLIM7-205ENST00000393551 RBAKDNA6NC62 111 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 C17orf112F2Z3M2 114 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 CDK2AP2O75956 126 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 KRTAP10-2P60368 255 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 ZNF266Q14584 549 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 ASB13Q8WXK3 278 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 SMIM3Q9BZL3 60 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 MDFICQ9P1T7 246 aa12.51□□□□□ -0.41
PDLIM7-205ENST00000393551 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 PFDN1O60925 122 aa12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 UBE2L3P68036 154 aaKnown RBP12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 FHL2Q14192 279 aa12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 Q6ZRN7 208 aaPredicted RBP12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 LYPD1Q8N2G4 141 aa12.5□□□□□ -0.41
PDLIM7-205ENST00000393551 PAX4O43316 350 aa12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 SSNA1O43805 119 aa12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 RPL12P30050 165 aaKnown RBP12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 CRYBA4P53673 196 aa12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 MBD2Q9UBB5 411 aa12.49□□□□□ -0.41
PDLIM7-205ENST00000393551 BTF3P20290 206 aaKnown RBP12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 CSN1S1P47710 185 aa12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 LINC00315P59091 139 aa12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 Q6AWC8 147 aa12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 C8orf49Q96NF6 230 aa12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 PRO0255Q9UI72 69 aa12.48□□□□□ -0.41
PDLIM7-205ENST00000393551 SIVA1O15304 175 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 KHDC3LQ587J8 217 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 AKAP14Q86UN6 197 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 ICOSQ9Y6W8 199 aa12.47□□□□□ -0.41
PDLIM7-205ENST00000393551 NXPH4O95158 308 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 SFTA3P0C7M3 94 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 LYPD5Q6UWN5 251 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 SCGB1C1Q8TD33 95 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 ZNF479Q96JC4 524 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 HYLS1Q96M11 299 aa12.46□□□□□ -0.41
PDLIM7-205ENST00000393551 IFNA5P01569 189 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 PET100P0DJ07 73 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 RASL10AQ92737 203 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 TVP23CQ96ET8 276 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
PDLIM7-205ENST00000393551 PGPA6NDG6 321 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 TAS2R45P59539 299 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 RAB2AP61019 212 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 TMEM183BQ1AE95 376 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 TMEM183AQ8IXX5 376 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 MAPKAPK5-AS1Q8N8E1 139 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 TMED6Q8WW62 240 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 FAT1Q14517 4588 aa12.44□□□□□ -0.42
PDLIM7-205ENST00000393551 SLAQ13239 276 aa12.43□□□□□ -0.42
PDLIM7-205ENST00000393551 MRPL23Q16540 153 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-205ENST00000393551 TDRG1Q3Y452 100 aa12.43□□□□□ -0.42
PDLIM7-205ENST00000393551 IQCF2Q8IXL9 164 aa12.43□□□□□ -0.42
PDLIM7-205ENST00000393551 TRAV8-1A0A0A6YYK1 113 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 K7EQD1 137 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 GNRH2O43555 120 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 TCTE3Q8IZS6 198 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 OR10G4Q8NGN3 311 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 SPXQ9BT56 116 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
PDLIM7-205ENST00000393551 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
PDLIM7-205ENST00000393551 GIPP09681 153 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-205ENST00000393551 GNG5P63218 68 aa12.41□□□□□ -0.42
PDLIM7-205ENST00000393551 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
PDLIM7-205ENST00000393551 NEGR1Q7Z3B1 354 aa12.41□□□□□ -0.42
PDLIM7-205ENST00000393551 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 IGHV3-16A0A0C4DH30 117 aa12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 FUSP35637 526 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 PQLC2Q6ZP29 291 aa12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 NAGKQ9UJ70 344 aa12.4□□□□□ -0.42
PDLIM7-205ENST00000393551 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 F6UZH7 168 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 TYMSP04818 313 aa12.39□□□□□ -0.43
PDLIM7-205ENST00000393551 WFDC10BQ8IUB3 73 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms