RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 HTN1P15515 57 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 MIR17HGQ75NE6 70 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 NPBQ8NG41 125 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 LINC01560Q8TB33 94 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 NPVFQ9HCQ7 196 aa2.59□□□□□ -1.99
XRN1-202ENST00000392981 TRAV2A0A0B4J234 112 aa2.59□□□□□ -2
XRN1-202ENST00000392981 IGLC7A0M8Q6 106 aa2.59□□□□□ -2
XRN1-202ENST00000392981 SOD1P00441 154 aa2.59□□□□□ -2
XRN1-202ENST00000392981 CNEP1R1Q8N9A8 125 aa2.59□□□□□ -2
XRN1-202ENST00000392981 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.59□□□□□ -2
XRN1-202ENST00000392981 VSTM2AQ8TAG5 236 aa2.59□□□□□ -2
XRN1-202ENST00000392981 TMEM190Q8WZ59 177 aa2.59□□□□□ -2
XRN1-202ENST00000392981 DPH3P1Q9H4G8 78 aa2.59□□□□□ -2
XRN1-202ENST00000392981 ZNF702PQ9H963 129 aa2.59□□□□□ -2
XRN1-202ENST00000392981 NHP2Q9NX24 153 aaKnown RBP2.59□□□□□ -2
XRN1-202ENST00000392981 NUMA1Q14980 2115 aa2.59□□□□□ -2
XRN1-202ENST00000392981 TRIP12Q14669 1992 aaPredicted RBP2.59□□□□□ -2
XRN1-202ENST00000392981 TRBV6-6A0A0A6YYG2 114 aa2.59□□□□□ -2
XRN1-202ENST00000392981 GRIFINA4D1Z8 144 aa2.59□□□□□ -2
XRN1-202ENST00000392981 SDCBPO00560 298 aaPredicted RBP2.59□□□□□ -2
XRN1-202ENST00000392981 FKBP2P26885 142 aaKnown RBP2.59□□□□□ -2
XRN1-202ENST00000392981 HMGA2P52926 109 aa2.59□□□□□ -2
XRN1-202ENST00000392981 RPS28P62857 69 aaKnown RBP2.59□□□□□ -2
XRN1-202ENST00000392981 SEC11AP67812 179 aa2.59□□□□□ -2
XRN1-202ENST00000392981 TMEM170BQ5T4T1 132 aa2.59□□□□□ -2
XRN1-202ENST00000392981 OR4X2Q8NGF9 303 aa2.59□□□□□ -2
XRN1-202ENST00000392981 ZNF492Q9P255 531 aa2.59□□□□□ -2
XRN1-202ENST00000392981 LOC107984640A0A0U1RRK4 108 aa2.58□□□□□ -2
XRN1-202ENST00000392981 H3BRM9 83 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGHV1-69P01742 117 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGHV1-8P0DP01 117 aa2.58□□□□□ -2
XRN1-202ENST00000392981 CYBAP13498 195 aa2.58□□□□□ -2
XRN1-202ENST00000392981 GNB2P62879 340 aa2.58□□□□□ -2
XRN1-202ENST00000392981 NRTNQ99748 197 aa2.58□□□□□ -2
XRN1-202ENST00000392981 RPRMQ9NS64 109 aa2.58□□□□□ -2
XRN1-202ENST00000392981 KNTC1P50748 2209 aa2.58□□□□□ -2
XRN1-202ENST00000392981 NUP210LQ5VU65 1888 aa2.58□□□□□ -2
XRN1-202ENST00000392981 TRBV20-1A0A075B6N2 111 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGLV2-23P01705 113 aa2.58□□□□□ -2
XRN1-202ENST00000392981 CRPP02741 224 aa2.58□□□□□ -2
XRN1-202ENST00000392981 ZNF721Q8TF20 911 aa2.58□□□□□ -2
XRN1-202ENST00000392981 TMEM106BQ9NUM4 274 aa2.58□□□□□ -2
XRN1-202ENST00000392981 NEUROG3Q9Y4Z2 214 aa2.58□□□□□ -2
XRN1-202ENST00000392981 SCN10AQ9Y5Y9 1956 aa2.58□□□□□ -2
XRN1-202ENST00000392981 PLXNB2O15031 1838 aa2.58□□□□□ -2
XRN1-202ENST00000392981 WDR90Q96KV7 1748 aa2.58□□□□□ -2
XRN1-202ENST00000392981 TRAV3A0A0B4J244 114 aa2.58□□□□□ -2
XRN1-202ENST00000392981 CD3DP04234 171 aa2.58□□□□□ -2
XRN1-202ENST00000392981 INSL3P51460 131 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGFBP7Q16270 282 aa2.58□□□□□ -2
XRN1-202ENST00000392981 TDRG1Q3Y452 100 aa2.58□□□□□ -2
XRN1-202ENST00000392981 GPHB5Q86YW7 130 aa2.58□□□□□ -2
XRN1-202ENST00000392981 LITAFQ99732 161 aa2.58□□□□□ -2
XRN1-202ENST00000392981 CHAC1Q9BUX1 264 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGLV1-50A0A075B6I6 118 aa2.58□□□□□ -2
XRN1-202ENST00000392981 IGKV3D-15A0A087WSY6 115 aa2.58□□□□□ -2
XRN1-202ENST00000392981 C17orf51A8MQB3 221 aa2.58□□□□□ -2
XRN1-202ENST00000392981 CLECL1Q8IZS7 167 aa2.58□□□□□ -2
XRN1-202ENST00000392981 PDFQ9HBH1 243 aa2.58□□□□□ -2
XRN1-202ENST00000392981 ZNF580Q9UK33 172 aa2.58□□□□□ -2
XRN1-202ENST00000392981 ITPR1Q14643 2758 aa2.57□□□□□ -2
XRN1-202ENST00000392981 TRRAPQ9Y4A5 3859 aa2.57□□□□□ -2
XRN1-202ENST00000392981 A0A1B0GWA3 101 aa2.57□□□□□ -2
XRN1-202ENST00000392981 H3BMM0 161 aa2.57□□□□□ -2
XRN1-202ENST00000392981 K7EP34 96 aa2.57□□□□□ -2
XRN1-202ENST00000392981 CBLN1P23435 193 aa2.57□□□□□ -2
XRN1-202ENST00000392981 LYZP61626 148 aa2.57□□□□□ -2
XRN1-202ENST00000392981 FOXI2Q6ZQN5 318 aa2.57□□□□□ -2
XRN1-202ENST00000392981 RPS27LQ71UM5 84 aaKnown RBP2.57□□□□□ -2
XRN1-202ENST00000392981 UBE2WQ96B02 151 aa2.57□□□□□ -2
XRN1-202ENST00000392981 CHCHD1Q96BP2 118 aaKnown RBP2.57□□□□□ -2
XRN1-202ENST00000392981 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
XRN1-202ENST00000392981 MRPL32Q9BYC8 188 aaKnown RBP2.57□□□□□ -2
XRN1-202ENST00000392981 IGHV3-21A0A0B4J1V1 117 aa2.57□□□□□ -2
XRN1-202ENST00000392981 TRAV17A0A0B4J275 112 aa2.57□□□□□ -2
XRN1-202ENST00000392981 J3QQQ9 107 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGLC6P0CF74 106 aa2.57□□□□□ -2
XRN1-202ENST00000392981 FUSP35637 526 aaKnown RBP eCLIP2.57□□□□□ -2
XRN1-202ENST00000392981 LINC00205P59089 165 aa2.57□□□□□ -2
XRN1-202ENST00000392981 FUT5Q11128 374 aa2.57□□□□□ -2
XRN1-202ENST00000392981 KLRD1Q13241 179 aa2.57□□□□□ -2
XRN1-202ENST00000392981 LY6DQ14210 128 aa2.57□□□□□ -2
XRN1-202ENST00000392981 Q6ZS52 159 aa2.57□□□□□ -2
XRN1-202ENST00000392981 SPATA12Q7Z6I5 190 aa2.57□□□□□ -2
XRN1-202ENST00000392981 WFDC5Q8TCV5 224 aa2.57□□□□□ -2
XRN1-202ENST00000392981 PXDNLA1KZ92 1463 aa2.57□□□□□ -2
XRN1-202ENST00000392981 ANKRD12Q6UB98 2062 aa2.57□□□□□ -2
XRN1-202ENST00000392981 TIMM17BO60830 172 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IFITM1P13164 125 aa2.57□□□□□ -2
XRN1-202ENST00000392981 PLNP26678 52 aa2.57□□□□□ -2
XRN1-202ENST00000392981 SP6Q3SY56 376 aa2.57□□□□□ -2
XRN1-202ENST00000392981 TMEM91Q6ZNR0 172 aa2.57□□□□□ -2
XRN1-202ENST00000392981 Q8N377 158 aa2.57□□□□□ -2
XRN1-202ENST00000392981 DSPPQ9NZW4 1301 aa2.57□□□□□ -2
XRN1-202ENST00000392981 URB1O60287 2271 aaKnown RBP2.57□□□□□ -2
XRN1-202ENST00000392981 PLIN4Q96Q06 1357 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGHV1-3A0A0C4DH29 117 aa2.57□□□□□ -2
XRN1-202ENST00000392981 IGHV7-4-1A0A0J9YVY3 117 aa2.57□□□□□ -2
XRN1-202ENST00000392981 FAM236AA0A1B0GUQ0 79 aa2.57□□□□□ -2
XRN1-202ENST00000392981 FAM236BA0A1B0GV22 79 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms