RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 C17orf58Q2M2W7 97 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 RPL36ALQ969Q0 106 aaKnown RBP15.7■□□□□ 0.1
SHANK1-203ENST00000391813 PROK2Q9HC23 129 aa15.7■□□□□ 0.1
SHANK1-203ENST00000391813 USF3Q68DE3 2245 aa15.69■□□□□ 0.1
SHANK1-203ENST00000391813 IGFL2Q6UWQ7 119 aa15.69■□□□□ 0.1
SHANK1-203ENST00000391813 HIGD1BQ9P298 99 aa15.69■□□□□ 0.1
SHANK1-203ENST00000391813 CADP27708 2225 aa15.69■□□□□ 0.1
SHANK1-203ENST00000391813 ANKRD39Q53RE8 183 aa15.68■□□□□ 0.1
SHANK1-203ENST00000391813 Q8TCH9 128 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 USMG5Q96IX5 58 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 PLXNA2O75051 1894 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 MALP21145 153 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 ZNF415Q09FC8 603 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 PLA2G5P39877 138 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 FAM120AOSQ5T036 256 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 G3V4G9 280 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 GATA3P23771 443 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 SH2D6Q7Z4S9 175 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 C15orf53Q8NAA6 179 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 PLXND1Q9Y4D7 1925 aa15.67■□□□□ 0.1
SHANK1-203ENST00000391813 Q6ZR03 302 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 NTN5Q8WTR8 489 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-203ENST00000391813 ZNF134P52741 427 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 NOTCH3Q9UM47 2321 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 DENND4AQ7Z401 1863 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 A0A087WWL8 130 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 E7EQL1 145 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 J3QQQ9 107 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 SOCS3O14543 225 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 C11orf1Q9H5F2 150 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 FAM223BA6NKX1 122 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 NDPQ00604 133 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 STHQ8IWL8 128 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 FAM223AQ8IWN6 122 aa15.66■□□□□ 0.1
SHANK1-203ENST00000391813 PHLDA1Q8WV24 401 aaPredicted RBP15.66■□□□□ 0.1
SHANK1-203ENST00000391813 CHCHD5Q9BSY4 110 aa15.65■□□□□ 0.1
SHANK1-203ENST00000391813 JPT2Q9H910 190 aa15.65■□□□□ 0.1
SHANK1-203ENST00000391813 IGHG4P01861 327 aa15.65■□□□□ 0.1
SHANK1-203ENST00000391813 SDHAF1A6NFY7 115 aa15.64■□□□□ 0.09
SHANK1-203ENST00000391813 IL17RELQ6ZVW7 336 aa15.64■□□□□ 0.09
SHANK1-203ENST00000391813 LINC01356Q8N9X3 169 aa15.64■□□□□ 0.09
SHANK1-203ENST00000391813 ZNRD1Q9P1U0 126 aa15.64■□□□□ 0.09
SHANK1-203ENST00000391813 TRGV4A0A0C4DH28 118 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 CFC1BP0CG36 223 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 CFC1P0CG37 223 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 LINC00173Q6ZV60 143 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 IGF2BP2-AS1Q96M15 143 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 CACNA1AO00555 2505 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 MORN5Q5VZ52 161 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 ANKRD29Q8N6D5 301 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 DEFB104AQ8WTQ1 72 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 WFDC12Q8WWY7 111 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 TEN1Q86WV5 123 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 LAMTOR3Q9UHA4 124 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 TRACP01848 142 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 LYPD2Q6UXB3 125 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 CARD19Q96LW7 228 aa15.63■□□□□ 0.09
SHANK1-203ENST00000391813 SS18L2Q9UHA2 77 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 NDUFA12Q9UI09 145 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 C1orf159Q96HA4 380 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 PTPRQQ9UMZ3 2332 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 KLRD1Q13241 179 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 FAM215AQ9Y5M1 114 aa15.62■□□□□ 0.09
SHANK1-203ENST00000391813 WT1P19544 449 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-203ENST00000391813 FAM110DQ8TAY7 271 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-203ENST00000391813 RHPN1-AS1Q9BWJ2 59 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 RHODO00212 210 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 LINC00527Q9UJ94 153 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 OTOGLQ3ZCN5 2332 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 HELZP42694 1942 aaKnown RBP15.61■□□□□ 0.09
SHANK1-203ENST00000391813 I3L3M4 83 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 ACYP1P07311 99 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 ASPHD1Q5U4P2 390 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 ZNF493Q6ZR52 646 aa15.61■□□□□ 0.09
SHANK1-203ENST00000391813 VWC2LB2RUY7 222 aa15.6■□□□□ 0.09
SHANK1-203ENST00000391813 ZNF503-AS2A6NEH8 195 aa15.6■□□□□ 0.09
SHANK1-203ENST00000391813 C8orf86Q6ZUL3 223 aa15.6■□□□□ 0.09
SHANK1-203ENST00000391813 WFDC2Q14508 124 aa15.6■□□□□ 0.09
SHANK1-203ENST00000391813 YLPM1P49750 1951 aaKnown RBP15.6■□□□□ 0.09
SHANK1-203ENST00000391813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.59■□□□□ 0.09
SHANK1-203ENST00000391813 BPESC1Q9GZL8 116 aa15.59■□□□□ 0.09
SHANK1-203ENST00000391813 TRAV26-2A0A0B4J265 109 aa15.59■□□□□ 0.09
SHANK1-203ENST00000391813 PRSS29PA6NIE9 313 aa15.59■□□□□ 0.09
SHANK1-203ENST00000391813 YPEL4Q96NS1 127 aa15.59■□□□□ 0.09
SHANK1-203ENST00000391813 DAZ1Q9NQZ3 744 aaKnown RBP15.59■□□□□ 0.09
SHANK1-203ENST00000391813 IGHV3-73A0A0B4J1V6 119 aa15.58■□□□□ 0.09
SHANK1-203ENST00000391813 C6orf226Q5I0X4 101 aa15.58■□□□□ 0.09
SHANK1-203ENST00000391813 DKK4Q9UBT3 224 aa15.58■□□□□ 0.09
SHANK1-203ENST00000391813 FXYD2P54710 66 aa15.58■□□□□ 0.08
SHANK1-203ENST00000391813 SRSF2Q01130 221 aaKnown RBP15.58■□□□□ 0.08
SHANK1-203ENST00000391813 ZNF491Q8N8L2 437 aa15.58■□□□□ 0.08
SHANK1-203ENST00000391813 PLCE1Q9P212 2302 aa15.58■□□□□ 0.08
SHANK1-203ENST00000391813 TEX36Q5VZQ5 186 aa15.58■□□□□ 0.08
SHANK1-203ENST00000391813 TRAV13-1A0A0B4J241 112 aa15.58■□□□□ 0.08
SHANK1-203ENST00000391813 IGHV1-69DA0A0B4J2H0 117 aa15.57■□□□□ 0.08
SHANK1-203ENST00000391813 SMIM20Q8N5G0 67 aa15.57■□□□□ 0.08
SHANK1-203ENST00000391813 RNF138Q8WVD3 245 aa15.57■□□□□ 0.08
SHANK1-203ENST00000391813 SPRY4Q9C004 299 aa15.57■□□□□ 0.08
SHANK1-203ENST00000391813 ZGRF1Q86YA3 2104 aa15.57■□□□□ 0.08
SHANK1-203ENST00000391813 ZNF625Q96I27 306 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms