RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 MESP1Q9BRJ9 268 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 IGKV1D-17A0A075B6S4 117 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 NREPQ16612 68 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 SP5Q6BEB4 398 aaPredicted RBP4.7□□□□□ -1.66
RFX3-204ENST00000382004 TRPM7Q96QT4 1865 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 LOC285556D6RIA3 1793 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 IGLV10-54A0A075B6I4 117 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 F8VRH5 84 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 Q6P435 159 aa4.7□□□□□ -1.66
RFX3-204ENST00000382004 IGLL5B9A064 214 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 ZNF134P52741 427 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 Q0VFX4 171 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 C12orf74Q32Q52 190 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 LHFPL1Q86WI0 220 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 ZNF492Q9P255 531 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 SPTAN1Q13813 2472 aaKnown RBP4.69□□□□□ -1.66
RFX3-204ENST00000382004 A0A0G2JRQ6 117 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 SEM1Q6ZVN7 128 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 ZNF581Q9P0T4 197 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 USF3Q68DE3 2245 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 ADAMTSL3P82987 1691 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 DYNAPQ8N1N2 210 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 SMIM20Q8N5G0 67 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 CAMK2N2Q96S95 79 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 CACNA1EQ15878 2313 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 H0Y9J4 135 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 POU2AF1Q16633 256 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 LGALS9BQ3B8N2 356 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 LGALS9CQ6DKI2 356 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 IGKV4-1P06312 121 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 SLC25A29Q8N8R3 303 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 IGLL1P15814 213 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 DKK2Q9UBU2 259 aa4.69□□□□□ -1.66
RFX3-204ENST00000382004 IGHV4OR15-8A0A075B7B6 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 A0A087WW49 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 C5orf63A6NC05 138 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 E7EQL1 145 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV3-30P01768 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV3-33P01772 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV3-30-3P0DP02 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV3-30-5P0DP03 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 U3KQE9 123 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 ROS1P08922 2347 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 WDR86Q86TI4 376 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 SHANK1Q9Y566 2161 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGLV3-32A0A0A0MS00 114 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV1-69DA0A0B4J2H0 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 FNDC10F2Z333 226 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGHV1-69P01742 117 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 C20orf144Q9BQM9 153 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 NCKAP5O14513 1909 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 IGLV3-12A0A075B6K2 115 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 NPYP01303 97 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 CSRP1P21291 193 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 RHOHQ15669 191 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 ARTNQ5T4W7 220 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 SPANXCQ9NY87 97 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 NYNRINQ9P2P1 1898 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 MARF1Q9Y4F3 1742 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 ETV2O00321 342 aaPredicted RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 NCR3O14931 201 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 MRPL53Q96EL3 112 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 REG4Q9BYZ8 158 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 GLI3P10071 1580 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 TRBV19A0A075B6N1 114 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 MRPL23Q16540 153 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 CASC2Q6XLA1 102 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 ZFP2Q6ZN57 461 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 Q6ZWC4 215 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 NDUFS7O75251 213 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 CFC1BP0CG36 223 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 CFC1P0CG37 223 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 PKIGQ9Y2B9 76 aa4.68□□□□□ -1.66
RFX3-204ENST00000382004 RBBP6Q7Z6E9 1792 aaKnown RBP4.68□□□□□ -1.66
RFX3-204ENST00000382004 J3QRE1 110 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 CCL25O15444 150 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 KLF2Q9Y5W3 355 aaPredicted RBP4.67□□□□□ -1.66
RFX3-204ENST00000382004 PARP14Q460N5 1801 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 HIST2H2BCQ6DN03 193 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 RNF144BQ7Z419 303 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 Q6ZRM9 215 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 PRR25Q96S07 402 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 TEX22C9J3V5 150 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 GNRH2O43555 120 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 A0A0B4J2C4 111 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 FAM236AA0A1B0GUQ0 79 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 FAM236BA0A1B0GV22 79 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 NDUFA4O00483 81 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 YPEL3P61236 119 aaPredicted RBP4.67□□□□□ -1.66
RFX3-204ENST00000382004 CR1LQ2VPA4 569 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 ZC2HC1AQ96GY0 325 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 MRPL36Q9P0J6 103 aaKnown RBP4.67□□□□□ -1.66
RFX3-204ENST00000382004 LTBP4Q8N2S1 1624 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 TET1Q8NFU7 2136 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 GATA3P23771 443 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 CFPP27918 469 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 UNQ6494/PRO21346Q6UXR6 183 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 TM2D2Q9BX73 214 aa4.67□□□□□ -1.66
RFX3-204ENST00000382004 DSCAML1Q8TD84 2053 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms