RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 HSD52Q0P140 79 aa12.54□□□□□ -0.4
VPS16-203ENST00000380469 C9orf47Q6ZRZ4 202 aa12.54□□□□□ -0.4
VPS16-203ENST00000380469 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
VPS16-203ENST00000380469 PRSS1P07477 247 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 Q8N8P6 123 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 AP1S3Q96PC3 154 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 U3KQE9 123 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 TRAV8-6A0A0B4J262 113 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 GATA1P15976 413 aaPredicted RBP12.53□□□□□ -0.4
VPS16-203ENST00000380469 RBX1P62877 108 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 C16orf92Q96LL3 132 aa12.53□□□□□ -0.4
VPS16-203ENST00000380469 IGF2RP11717 2491 aa12.52□□□□□ -0.41
VPS16-203ENST00000380469 OR2K2Q8NGT1 345 aa12.52□□□□□ -0.41
VPS16-203ENST00000380469 TRAV41A0A0B4J266 112 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 H3BRM9 83 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 TMEM219Q86XT9 240 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 TMEM158Q8WZ71 300 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 ATP6V0BQ99437 205 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 MOB4Q9Y3A3 225 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 TRGV3P03979 118 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 PCP2Q8IVA1 136 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 PIFOQ8TCI5 191 aa12.51□□□□□ -0.41
VPS16-203ENST00000380469 ATRXP46100 2492 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 ODF1Q14990 250 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 UFC1Q9Y3C8 167 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 IGHV7-4-1A0A0J9YVY3 117 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 ATP5LO75964 103 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 CDKN1BP46527 198 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 ADAMTSL5Q6ZMM2 481 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 ZMAT4Q9H898 229 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 SMPXQ9UHP9 88 aa12.5□□□□□ -0.41
VPS16-203ENST00000380469 C9orf118A6NHY6 69 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 IGKCP01834 107 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 SPTBN1Q01082 2364 aaKnown RBP12.49□□□□□ -0.41
VPS16-203ENST00000380469 COL6A6A6NMZ7 2263 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 GAGE10A6NGK3 116 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 PCP4P48539 62 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 FOXC2Q99958 501 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
VPS16-203ENST00000380469 IGHV4-4A0A075B6R2 117 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 ARL3P36405 182 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 LAGE3Q14657 143 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 C9orf139Q6ZV77 190 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 MYOZ3Q8TDC0 251 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 LINC00527Q9UJ94 153 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 SMIM17P0DL12 118 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 GTF2H5Q6ZYL4 71 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 GLMPQ8WWB7 406 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 LENEPQ9Y5L5 61 aa12.48□□□□□ -0.41
VPS16-203ENST00000380469 ASH1LQ9NR48 2969 aaKnown RBP12.47□□□□□ -0.41
VPS16-203ENST00000380469 IGHV3OR16-10A0A075B7F0 116 aa12.47□□□□□ -0.41
VPS16-203ENST00000380469 GAGE12BA1L429 117 aa12.47□□□□□ -0.41
VPS16-203ENST00000380469 DPM2O94777 84 aa12.47□□□□□ -0.41
VPS16-203ENST00000380469 NRACQ8N912 160 aa12.47□□□□□ -0.41
VPS16-203ENST00000380469 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
VPS16-203ENST00000380469 RNF151Q2KHN1 245 aa12.46□□□□□ -0.41
VPS16-203ENST00000380469 C19orf54Q5BKX5 351 aa12.46□□□□□ -0.41
VPS16-203ENST00000380469 CACNA1BQ00975 2339 aa12.46□□□□□ -0.41
VPS16-203ENST00000380469 TRAV26-2A0A0B4J265 109 aa12.46□□□□□ -0.41
VPS16-203ENST00000380469 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
VPS16-203ENST00000380469 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
VPS16-203ENST00000380469 LINC00477Q96M19 166 aa12.46□□□□□ -0.41
VPS16-203ENST00000380469 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 H3BVH4 76 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 LY6DQ14210 128 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 OCIAD2Q56VL3 154 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 Q6ZQT7 251 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 ITLN2Q8WWU7 325 aaPredicted RBP12.45□□□□□ -0.42
VPS16-203ENST00000380469 C20orf173Q96LM9 149 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 H3BUT2 72 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 MRAP2Q96G30 205 aa12.45□□□□□ -0.42
VPS16-203ENST00000380469 A0A0G2JLM5 398 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 SVEP1Q4LDE5 3571 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 IGKV2D-26A0A0A0MRZ7 120 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 NDUFA4O00483 81 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 OVOL1O14753 267 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 PRR9Q5T870 116 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
VPS16-203ENST00000380469 J3KRW8 73 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 RAB37Q96AX2 223 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 TRAV21A0A0B4J279 112 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 C21orf62-AS1Q17RA5 79 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 ZC2HC1BQ5TFG8 222 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 UNQ9165/PRO28630Q6UXU0 137 aa12.43□□□□□ -0.42
VPS16-203ENST00000380469 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
VPS16-203ENST00000380469 C19orf84I3L1E1 186 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms