RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SERF1AO75920 110 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 SLURP1P55000 103 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 RPS20P60866 119 aaKnown RBP14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 RIGQ13278 110 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 PYY3Q5JQD4 70 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 OR10J3Q5JRS4 329 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 C4orf3Q8WVX3 66 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 F6UB75 175 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 KHDC1LQ5JSQ8 128 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 HIST2H2BDQ6DRA6 164 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 OR11H1Q8NG94 326 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 TMEM18Q96B42 140 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 MS4A6AQ9H2W1 248 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 LENEPQ9Y5L5 61 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 NOTCH2Q04721 2471 aa14.97□□□□□ -0.01
PDLIM5-205ENST00000380180 C2orf70A6NJV1 201 aa14.96□□□□□ -0.01
PDLIM5-205ENST00000380180 TMEM160Q9NX00 188 aa14.96□□□□□ -0.01
PDLIM5-205ENST00000380180 SORL1Q92673 2214 aa14.96□□□□□ -0.02
PDLIM5-205ENST00000380180 ID1P41134 155 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 HIST1H1AQ02539 215 aaPredicted RBP14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 SCGB2A2Q13296 93 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 LINC01559Q495D7 138 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 OR8A1Q8NGG7 326 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 BORCS7Q96B45 105 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 LINC01619G3V211 115 aa14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 RNASE1P07998 156 aaKnown RBP14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 ALKBH7Q9BT30 221 aaPredicted RBP14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 ANK3Q12955 4377 aaKnown RBP14.95□□□□□ -0.02
PDLIM5-205ENST00000380180 HIVEP2P31629 2446 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 ESDP10768 282 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 TFPI2P48307 235 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 SSTP61278 116 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 SAMD13Q5VXD3 122 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 FER1L6-AS1Q8NA97 138 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 KLHL30-AS1Q8NEE0 82 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 C18orf32Q8TCD1 76 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 DPF1Q92782 380 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 DUX3Q96PT4 197 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 C11orf21Q9P2W6 132 aa14.94□□□□□ -0.02
PDLIM5-205ENST00000380180 IGLC6P0CF74 106 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 PRR9Q5T870 116 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 Q6ZQT7 251 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 OR1N2Q8NGR9 330 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 RCHY1Q96PM5 261 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 NIT2Q9NQR4 276 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 IGKV3D-20A0A0C4DH25 116 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 A0A1B0GW15 77 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 ADAMTSL5Q6ZMM2 481 aa14.93□□□□□ -0.02
PDLIM5-205ENST00000380180 MUC21A0A0G2JKD1 596 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 MUC21A0A140T8X8 626 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 LY6G6DO95868 133 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 IQCJQ1A5X6 159 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 MUC21Q5SSG8 566 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 ZFAND2AQ8N6M9 145 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 GATD1Q8NB37 220 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 LOC102724200A0A096LPH7 203 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 CTRLP40313 264 aa14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 ZNF418Q8TF45 676 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-205ENST00000380180 AGRNO00468 2067 aa14.91□□□□□ -0.02
PDLIM5-205ENST00000380180 J3KRW8 73 aa14.91□□□□□ -0.02
PDLIM5-205ENST00000380180 K7EQG2 157 aa14.91□□□□□ -0.02
PDLIM5-205ENST00000380180 FAM19A4Q96LR4 140 aa14.91□□□□□ -0.02
PDLIM5-205ENST00000380180 M0QZ24 198 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 C11orf44Q8N8P7 122 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 LINC01006Q8NI28 216 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 WNK1Q9H4A3 2382 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 ZNF688P0C7X2 276 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 HILS1P60008 231 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 ZNF493Q6ZR52 646 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 C16orf95Q9H693 158 aa14.9□□□□□ -0.02
PDLIM5-205ENST00000380180 PCP4L1A6NKN8 68 aa14.89□□□□□ -0.03
PDLIM5-205ENST00000380180 PAFAH1B2P68402 229 aa14.89□□□□□ -0.03
PDLIM5-205ENST00000380180 DLX4Q92988 240 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-205ENST00000380180 GPX1P07203 203 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 NTF3P20783 257 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 SNRPD3P62318 126 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 PSMG4Q5JS54 123 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 CDPF1Q6NVV7 123 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 OR9G4Q8NGQ1 327 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 WFDC12Q8WWY7 111 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 OTOGQ6ZRI0 2925 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 SETD2Q9BYW2 2564 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 CD28P10747 220 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 TWIST1Q15672 202 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 PEMTQ9UBM1 199 aa14.88□□□□□ -0.03
PDLIM5-205ENST00000380180 JOSD1Q15040 202 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 KCNS1Q96KK3 526 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 SAMD10Q9BYL1 202 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 TRBV7-9A0A0J9YWB2 115 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 CD33P20138 364 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 KIR3DS1Q14943 382 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 CNFNQ9BYD5 112 aa14.87□□□□□ -0.03
PDLIM5-205ENST00000380180 A0A1W2PRX2 142 aa14.86□□□□□ -0.03
PDLIM5-205ENST00000380180 RNASE4P34096 147 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-205ENST00000380180 APRG1Q8IVJ8 170 aa14.86□□□□□ -0.03
PDLIM5-205ENST00000380180 MSRB1Q9NZV6 116 aa14.86□□□□□ -0.03
PDLIM5-205ENST00000380180 TRAV21A0A0B4J279 112 aa14.85□□□□□ -0.03
PDLIM5-205ENST00000380180 RAX2Q96IS3 184 aa14.85□□□□□ -0.03
PDLIM5-205ENST00000380180 CSN3P07498 182 aa14.85□□□□□ -0.03
PDLIM5-205ENST00000380180 CITED2Q99967 270 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms