RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
FXN-201ENST00000377270 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
FXN-201ENST00000377270 ORM1P02763 201 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 PYYP10082 97 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 RPS28P62857 69 aaKnown RBP12.18□□□□□ -0.46
FXN-201ENST00000377270 TMEM219Q86XT9 240 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 TMEM158Q8WZ71 300 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 PAXXQ9BUH6 204 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 GFRA4Q9GZZ7 299 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 K7ENP7 123 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 P01737 135 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 ZNF833PQ6ZTB9 187 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 RNASE6Q93091 150 aaKnown RBP12.18□□□□□ -0.46
FXN-201ENST00000377270 LINC00477Q96M19 166 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 HIST1H4GQ99525 98 aa12.18□□□□□ -0.46
FXN-201ENST00000377270 MRPL20Q9BYC9 149 aaKnown RBP12.18□□□□□ -0.46
FXN-201ENST00000377270 NDUFB3O43676 98 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 PRCDQ00LT1 54 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 LINC00322Q6ZN03 302 aaPredicted RBP12.17□□□□□ -0.46
FXN-201ENST00000377270 ODF3Q96PU9 254 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 DYNLRB1Q9NP97 96 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 EPDR1Q9UM22 224 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 SAA1P0DJI8 122 aaPredicted RBP12.17□□□□□ -0.46
FXN-201ENST00000377270 TAL2Q16559 108 aa12.17□□□□□ -0.46
FXN-201ENST00000377270 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
FXN-201ENST00000377270 SHISA9B4DS77 424 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 E7EQL1 145 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 HOXA3O43365 443 aaPredicted RBP12.16□□□□□ -0.46
FXN-201ENST00000377270 FXYD7P58549 80 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 ZNRF2Q8NHG8 242 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 POLEQ07864 2286 aa12.16□□□□□ -0.46
FXN-201ENST00000377270 C19orf71A6NCJ1 209 aa12.15□□□□□ -0.46
FXN-201ENST00000377270 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
FXN-201ENST00000377270 HAX1O00165 279 aa12.15□□□□□ -0.46
FXN-201ENST00000377270 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
FXN-201ENST00000377270 CTSZQ9UBR2 303 aa12.15□□□□□ -0.46
FXN-201ENST00000377270 PTPRQQ9UMZ3 2332 aa12.15□□□□□ -0.47
FXN-201ENST00000377270 CRYGBP07316 175 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 MYCNOSP40205 109 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 MLANAQ16655 118 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 C3orf22Q8N5N4 141 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 IFI27L1Q96BM0 104 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 FAM236AA0A1B0GUQ0 79 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 FAM236BA0A1B0GV22 79 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 CD7P09564 240 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 IFI27P40305 119 aaPredicted RBP12.14□□□□□ -0.47
FXN-201ENST00000377270 ZNF672Q499Z4 452 aaPredicted RBP12.14□□□□□ -0.47
FXN-201ENST00000377270 TIMD4Q96H15 378 aa12.14□□□□□ -0.47
FXN-201ENST00000377270 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 SCGB1C2P0DMR2 95 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 GTSCR1Q86UQ5 136 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 FXYD5Q96DB9 178 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 RBAKDNA6NC62 111 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 M0R2P5 195 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 KLF17Q5JT82 389 aaPredicted RBP12.13□□□□□ -0.47
FXN-201ENST00000377270 C10orf113Q5VZT2 155 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 VKORC1Q9BQB6 163 aa12.13□□□□□ -0.47
FXN-201ENST00000377270 ENSAO43768 121 aaKnown RBP12.12□□□□□ -0.47
FXN-201ENST00000377270 LOXP28300 417 aaPredicted RBP12.12□□□□□ -0.47
FXN-201ENST00000377270 C2orf83Q53S99 150 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 WFDC3Q8IUB2 231 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 C1orf43Q9BWL3 253 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 HHLA3Q9XRX5 114 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 SPTA1P02549 2419 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 LINC01549A6NIU2 74 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 TCL1BO95988 128 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
FXN-201ENST00000377270 ARFGEF3Q5TH69 2177 aa12.12□□□□□ -0.47
FXN-201ENST00000377270 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 CD69Q07108 199 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 ZNF493Q6ZR52 646 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 PDPNQ86YL7 162 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 TRAV2A0A0B4J234 112 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.11□□□□□ -0.47
FXN-201ENST00000377270 PLAUP00749 431 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 CD3EP07766 207 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 NDUFA4L2Q9NRX3 87 aa12.11□□□□□ -0.47
FXN-201ENST00000377270 MYMXA0A1B0GTQ4 84 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 PGPA6NDG6 321 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 E7EUB6 86 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 FMC1Q96HJ9 113 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 TMEM160Q9NX00 188 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 KAAG1Q9UBP8 84 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 UBE2D3P61077 147 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 UBE2D2P62837 147 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 ERHP84090 104 aaKnown RBP12.1□□□□□ -0.47
FXN-201ENST00000377270 PATE2Q6UY27 113 aa12.1□□□□□ -0.47
FXN-201ENST00000377270 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 WI2-2373I1.2A0A1W2PRP0 233 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 RS1O15537 224 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 DLX6P56179 175 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 TMEM155Q4W5P6 130 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 LINC00311Q8N616 119 aa12.09□□□□□ -0.47
FXN-201ENST00000377270 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms