RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ALG5Q9Y673 324 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 RYR1P21817 5038 aa14.55□□□□□ -0.08
VSX1-201ENST00000376707 TAS2R45P59539 299 aa14.54□□□□□ -0.08
VSX1-201ENST00000376707 UBE2L3P68036 154 aaKnown RBP14.54□□□□□ -0.08
VSX1-201ENST00000376707 IBA57Q5T440 356 aaKnown RBP14.54□□□□□ -0.08
VSX1-201ENST00000376707 VSIG2Q96IQ7 327 aa14.54□□□□□ -0.08
VSX1-201ENST00000376707 A0A096LPF7 62 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 A0A1W2PPQ1 181 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 SPINK4O60575 86 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 PTTG1O95997 202 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 CSN1S1P47710 185 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 ARPC5LQ9BPX5 153 aa14.53□□□□□ -0.08
VSX1-201ENST00000376707 IGHV1OR15-1A0A075B7D0 117 aa14.52□□□□□ -0.09
VSX1-201ENST00000376707 TP53TG3Q9ULZ0 132 aa14.52□□□□□ -0.09
VSX1-201ENST00000376707 MUC4Q99102 2169 aa14.51□□□□□ -0.09
VSX1-201ENST00000376707 Q8TAT8 98 aa14.51□□□□□ -0.09
VSX1-201ENST00000376707 MRPL16Q9NX20 251 aaKnown RBP14.51□□□□□ -0.09
VSX1-201ENST00000376707 DIRC3C9JPN6 131 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 CDK2AP2O75956 126 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 IGHV3-53P01767 116 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 ZNF266Q14584 549 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 ACOT6Q3I5F7 207 aaPredicted RBP14.5□□□□□ -0.09
VSX1-201ENST00000376707 Q6ZQT7 251 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 SPATA12Q7Z6I5 190 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 ST6GAL2Q96JF0 529 aa14.5□□□□□ -0.09
VSX1-201ENST00000376707 PAX4O43316 350 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 BTF3P20290 206 aaKnown RBP14.49□□□□□ -0.09
VSX1-201ENST00000376707 PQLC2Q6ZP29 291 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 TMED6Q8WW62 240 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 OTORQ9NRC9 128 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 LENEPQ9Y5L5 61 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 ICOSQ9Y6W8 199 aa14.49□□□□□ -0.09
VSX1-201ENST00000376707 ZNF415Q09FC8 603 aa14.48□□□□□ -0.09
VSX1-201ENST00000376707 A0A1W2PPV4 95 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 EIF3GO75821 320 aaKnown RBP eCLIP14.47□□□□□ -0.09
VSX1-201ENST00000376707 RAB2AP61019 212 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 SLAQ13239 276 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 ARL6IP6Q8N6S5 226 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 AQP10Q96PS8 301 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 KRTAP4-5Q9BYR2 181 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 MED28Q9H204 178 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 PRO0255Q9UI72 69 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 ABCA13Q86UQ4 5058 aa14.47□□□□□ -0.09
VSX1-201ENST00000376707 SIVA1O15304 175 aa14.46□□□□□ -0.09
VSX1-201ENST00000376707 MUC21Q5SSG8 566 aa14.46□□□□□ -0.09
VSX1-201ENST00000376707 Q6AWC8 147 aa14.46□□□□□ -0.09
VSX1-201ENST00000376707 OR2G3Q8NGZ4 309 aa14.46□□□□□ -0.09
VSX1-201ENST00000376707 FAM74A1Q5RGS3 127 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 MAPKAPK5-AS1Q8N8E1 139 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 OR10G4Q8NGN3 311 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 OR10G9Q8NGN4 311 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 OR10G7Q8NGN6 311 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 ASB13Q8WXK3 278 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 HYLS1Q96M11 299 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 HHLA3Q9XRX5 114 aa14.45□□□□□ -0.1
VSX1-201ENST00000376707 PGPA6NDG6 321 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 NXPH4O95158 308 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 CRYBA4P53673 196 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 LINC00315P59091 139 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 LCE2DQ5TA82 110 aaPredicted RBP14.44□□□□□ -0.1
VSX1-201ENST00000376707 CMTM2Q8TAZ6 248 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 C8orf49Q96NF6 230 aa14.44□□□□□ -0.1
VSX1-201ENST00000376707 PSMG3Q9BT73 122 aaPredicted RBP14.44□□□□□ -0.1
VSX1-201ENST00000376707 FHL2Q14192 279 aa14.43□□□□□ -0.1
VSX1-201ENST00000376707 MRPL23Q16540 153 aaKnown RBP14.43□□□□□ -0.1
VSX1-201ENST00000376707 MDFICQ9P1T7 246 aa14.43□□□□□ -0.1
VSX1-201ENST00000376707 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
VSX1-201ENST00000376707 GIPP09681 153 aaPredicted RBP14.42□□□□□ -0.1
VSX1-201ENST00000376707 FAM159AQ6UWV7 190 aa14.42□□□□□ -0.1
VSX1-201ENST00000376707 HSD17B11Q8NBQ5 300 aa14.42□□□□□ -0.1
VSX1-201ENST00000376707 LRP1BQ9NZR2 4599 aa14.42□□□□□ -0.1
VSX1-201ENST00000376707 HSPG2P98160 4391 aa14.42□□□□□ -0.1
VSX1-201ENST00000376707 TRGV11A0A075B6L2 103 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 HMGB3O15347 200 aaKnown RBP14.41□□□□□ -0.1
VSX1-201ENST00000376707 STAG3L2P0CL84 134 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 STAG3L3P0CL85 134 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 ARL14EPLP0DKL9 152 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 CDC34P49427 236 aaPredicted RBP14.41□□□□□ -0.1
VSX1-201ENST00000376707 KRTAP10-2P60368 255 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 TMEM183BQ1AE95 376 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 TDRG1Q3Y452 100 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 Q5BKY6 102 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 TMEM183AQ8IXX5 376 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 SUN5Q8TC36 379 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 RPH3ALQ9UNE2 315 aa14.41□□□□□ -0.1
VSX1-201ENST00000376707 ATP6V0CP27449 155 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 SERF2P84101 59 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 LYPD5Q6UWN5 251 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 GOLT1AQ6ZVE7 132 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 NEGR1Q7Z3B1 354 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 RAB24Q969Q5 203 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 SPXQ9BT56 116 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 NAGKQ9UJ70 344 aa14.4□□□□□ -0.1
VSX1-201ENST00000376707 MBP02144 154 aa14.39□□□□□ -0.11
VSX1-201ENST00000376707 SFTA3P0C7M3 94 aa14.39□□□□□ -0.11
VSX1-201ENST00000376707 RASL10AQ92737 203 aa14.39□□□□□ -0.11
VSX1-201ENST00000376707 ZNF479Q96JC4 524 aa14.39□□□□□ -0.11
VSX1-201ENST00000376707 TRAV8-1A0A0A6YYK1 113 aa14.38□□□□□ -0.11
VSX1-201ENST00000376707 Q6ZRN7 208 aaPredicted RBP14.38□□□□□ -0.11
VSX1-201ENST00000376707 PCNPQ8WW12 178 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms