RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 SIVA1O15304 175 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 C11orf21Q9P2W6 132 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 TRAV8-2A0A0B4J237 113 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 EFNA4P52798 201 aa11.19□□□□□ -0.62
MSH5-201ENST00000375703 A6NDN8 102 aa11.18□□□□□ -0.62
MSH5-201ENST00000375703 PRSS1P07477 247 aa11.18□□□□□ -0.62
MSH5-201ENST00000375703 PCP2Q8IVA1 136 aa11.18□□□□□ -0.62
MSH5-201ENST00000375703 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
MSH5-201ENST00000375703 MED13LQ71F56 2210 aa11.18□□□□□ -0.62
MSH5-201ENST00000375703 NPFFO15130 113 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 LMO4P61968 165 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 HSD52Q0P140 79 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 OR4X2Q8NGF9 303 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 ADAMTSL5Q6ZMM2 481 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 AP1S3Q96PC3 154 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 BPESC1Q9GZL8 116 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
MSH5-201ENST00000375703 H3BRM9 83 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 Q8N8P6 123 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 MRPL53Q96EL3 112 aaKnown RBP11.16□□□□□ -0.62
MSH5-201ENST00000375703 SVEP1Q4LDE5 3571 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 TRGV3P03979 118 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 OR2K2Q8NGT1 345 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 HIF1ANQ9NWT6 349 aa11.16□□□□□ -0.62
MSH5-201ENST00000375703 GAGE12BA1L429 117 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 GAGE10A6NGK3 116 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 ODF1Q14990 250 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 CLUHP3Q96NS8 147 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 U3KQE9 123 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 CSTL1Q9H114 145 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 ZMAT4Q9H898 229 aa11.15□□□□□ -0.62
MSH5-201ENST00000375703 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 PSMG4Q5JS54 123 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 Q5PR19 223 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 PIFOQ8TCI5 191 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 C16orf92Q96LL3 132 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 HHLA3Q9XRX5 114 aa11.15□□□□□ -0.63
MSH5-201ENST00000375703 IGLV2-18A0A075B6J9 118 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 Q6ZQT7 251 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 LINC00527Q9UJ94 153 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 IGKCP01834 107 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 SPANXN1Q5VSR9 72 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 FOXC2Q99958 501 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 UFC1Q9Y3C8 167 aa11.14□□□□□ -0.63
MSH5-201ENST00000375703 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 H3BUT2 72 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 SMIM17P0DL12 118 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 OCIAD2Q56VL3 154 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 TRAV26-2A0A0B4J265 109 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 ATP5LO75964 103 aa11.13□□□□□ -0.63
MSH5-201ENST00000375703 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
MSH5-201ENST00000375703 IGHV3OR16-10A0A075B7F0 116 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 IGKV2D-26A0A0A0MRZ7 120 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 GTF2H5Q6ZYL4 71 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 RAB37Q96AX2 223 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 LAGE3Q14657 143 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 NRACQ8N912 160 aa11.12□□□□□ -0.63
MSH5-201ENST00000375703 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
MSH5-201ENST00000375703 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 IGHV4-4A0A075B6R2 117 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 TMEM8BA6NDV4 472 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 DPM2O94777 84 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
MSH5-201ENST00000375703 ARL3P36405 182 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 GLMPQ8WWB7 406 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 C20orf173Q96LM9 149 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 ATP6V0BQ99437 205 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 TTTY13Q9BZ97 58 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 H3BVH4 76 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 J3KRW8 73 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 SRSF1Q07955 248 aaKnown RBP eCLIP11.1□□□□□ -0.637e-7■■■□□ 15.3
MSH5-201ENST00000375703 ZC2HC1BQ5TFG8 222 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 C9orf139Q6ZV77 190 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 JMJD8Q96S16 334 aa11.1□□□□□ -0.63
MSH5-201ENST00000375703 ATRXP46100 2492 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 IGF1P05019 195 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 PRR9Q5T870 116 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 UFSP1Q6NVU6 142 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 COL6A6A6NMZ7 2263 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 TRAV40A0A0B4J280 105 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
MSH5-201ENST00000375703 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms