RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 TRAV2A0A0B4J234 112 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 TRAV5A0A0B4J249 113 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 RNF222A6NCQ9 220 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 KNCNA6PVL3 124 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 H3BTX0 84 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 ARPC5O15511 151 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 MPDU1O75352 247 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 EIF3GO75821 320 aaKnown RBP eCLIP3.13□□□□□ -1.91
PMS1-202ENST00000374826 IFNA5P01569 189 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 HLA-DMBP28068 263 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 GALR1P47211 349 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 RPL29P47914 159 aaKnown RBP3.13□□□□□ -1.91
PMS1-202ENST00000374826 PLP1P60201 277 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 HAGHQ16775 308 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 DEFB135Q30KP9 77 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 ACTL10Q5JWF8 245 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 C1orf194Q5T5A4 169 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 SPATA31B1PQ5VZV4 182 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 Q6ZRG5 221 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 RNF182Q8N6D2 247 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 ZNF709Q8N972 641 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 HSD17B11Q8NBQ5 300 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 ASB13Q8WXK3 278 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 TMEM37Q8WXS4 190 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 LINC00052Q96N35 136 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 RCHY1Q96PM5 261 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 AQP10Q96PS8 301 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 KCNIP2Q9NS61 270 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 PRO0461Q9UI25 63 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 TNFSF18Q9UNG2 199 aa3.13□□□□□ -1.91
PMS1-202ENST00000374826 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 C17orf112F2Z3M2 114 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 F6UB75 175 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 SLC17A3O00476 420 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 MRPS12O15235 138 aaKnown RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 CA1P00915 261 aaPredicted RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 PYYP10082 97 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 RPL7P18124 248 aaKnown RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 S100A7P31151 101 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 PSMB3P49720 205 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 MEOX2P50222 304 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 RAB2AP61019 212 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 SNRPD3P62318 126 aaKnown RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 GDF5OSQ5U4N7 250 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 FAM78BQ5VT40 261 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 RPL7L1Q6DKI1 246 aaKnown RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 LINC00322Q6ZN03 302 aaPredicted RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 TMUB2Q71RG4 321 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 MIR17HGQ75NE6 70 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 STHQ8IWL8 128 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 INO80EQ8NBZ0 244 aaPredicted RBP3.12□□□□□ -1.91
PMS1-202ENST00000374826 OR1L4Q8NGR5 311 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 GPR82Q96P67 336 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 PFDN5Q99471 154 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 TM2D3Q9BRN9 247 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 SH3BGRL3Q9H299 93 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 U3KQK5 164 aa3.12□□□□□ -1.91
PMS1-202ENST00000374826 A0A087X0K7 114 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 BORCS7-ASMTA0A0B4J1R7 106 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 TRAV8-2A0A0B4J237 113 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 IGHV3-16A0A0C4DH30 117 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 A0A1B0GVG6 124 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 H3BQ15 152 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 UBE2CO00762 179 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ISLRO14498 428 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 HMGB3O15347 200 aaKnown RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 OR7C2O60412 319 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 OR10J4P0C629 311 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ZNF705DP0CH99 300 aaPredicted RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 ZNF705BP0CI00 300 aaPredicted RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 IGLC2P0DOY2 106 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ATP6V0CP27449 155 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ID1P41134 155 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 APOC4P55056 127 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 CMC4P56277 68 aaPredicted RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 FXYD7P58549 80 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ZNF266Q14584 549 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 LCN15Q6UWW0 184 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 S100A7AQ86SG5 101 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 BPIFA4PQ86YQ2 179 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 OR4B1Q8NGF8 309 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 LRRC20Q8TCA0 184 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 BLNKQ8WV28 456 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 FAM167A-AS1Q96KT0 104 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 SLC25A2Q9BXI2 301 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 MRPL32Q9BYC8 188 aaKnown RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 PARD6GQ9BYG4 376 aaPredicted RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 MFFQ9GZY8 342 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 SAV1Q9H4B6 383 aaPredicted RBP3.11□□□□□ -1.91
PMS1-202ENST00000374826 ZNF586Q9NXT0 402 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 CLEC5AQ9NY25 188 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 CELA1Q9UNI1 258 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 FUT9Q9Y231 359 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 TENM2Q9NT68 2774 aa3.11□□□□□ -1.91
PMS1-202ENST00000374826 KIR2DL5BA0A0G2JN68 375 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 KIR2DL5BA0A0G2JPC4 375 aa3.1□□□□□ -1.91
PMS1-202ENST00000374826 A0A0J9YX75 114 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms