RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 C17orf58Q2M2W7 97 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 TMEM75Q8N9X5 138 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 TMEM126AQ9H061 195 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 TMEM78Q5T7P6 136 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 PLXNB1O43157 2135 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 INS-IGF2F8WCM5 200 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 LINC00694P0DN24 101 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 ERHP84090 104 aaKnown RBP7.47□□□□□ -1.21
SF3A3-201ENST00000373019 LY6DQ14210 128 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 C17orf77Q96MU5 243 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 MSRB1Q9NZV6 116 aa7.47□□□□□ -1.21
SF3A3-201ENST00000373019 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.21
SF3A3-201ENST00000373019 NDUFA11Q86Y39 141 aa7.46□□□□□ -1.21
SF3A3-201ENST00000373019 ZNRD1Q9P1U0 126 aa7.46□□□□□ -1.21
SF3A3-201ENST00000373019 KALRNO60229 2985 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-201ENST00000373019 C10orf55Q5SWW7 151 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 ZNRF1Q8ND25 227 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 OR11H6Q8NGC7 330 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 OR10J6PQ8NGY7 276 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.22
SF3A3-201ENST00000373019 ROS1P08922 2347 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 CREBBPQ92793 2442 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 TNFRSF6BO95407 300 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 PRB1P04280 392 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 CHCHD5Q9BSY4 110 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.22
SF3A3-201ENST00000373019 CENPEQ02224 2701 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 KLF14Q8TD94 323 aaPredicted RBP7.45□□□□□ -1.22
SF3A3-201ENST00000373019 PLEKHB2Q96CS7 222 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 PSMG3-AS1Q96PY0 264 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 HECTD1Q9ULT8 2610 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 SLC25A20O43772 301 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 SCGB1C2P0DMR2 95 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 Q8N1Y9 231 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 DNAJC30Q96LL9 226 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 C15orf53Q8NAA6 179 aa7.45□□□□□ -1.22
SF3A3-201ENST00000373019 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
SF3A3-201ENST00000373019 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 AAMDCQ9H7C9 122 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 PRR14LQ5THK1 2151 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 WIPF1O43516 503 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 PLNP26678 52 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 DKK4Q9UBT3 224 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 DSCAMO60469 2012 aa7.44□□□□□ -1.22
SF3A3-201ENST00000373019 TRAV25A0A0B4J276 109 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 SMIM9A6NGZ8 99 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 ADIPOQQ15848 244 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 BAALCQ8WXS3 180 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 CXXC4Q9H2H0 198 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 ABCA1O95477 2261 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 SH2D1AO60880 128 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 CFC1BP0CG36 223 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 CFC1P0CG37 223 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 SIGLEC15Q6ZMC9 328 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 TRPT1Q86TN4 253 aaKnown RBP7.43□□□□□ -1.22
SF3A3-201ENST00000373019 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 DOPEY2Q9Y3R5 2298 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 MAGEA5P43359 124 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 MED13Q9UHV7 2174 aa7.43□□□□□ -1.22
SF3A3-201ENST00000373019 TRBV19A0A075B6N1 114 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 A0A1W2PNU3 283 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-201ENST00000373019 C9JAW5 83 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 CEACAM4O75871 244 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 IGLC6P0CF74 106 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 EGR2P11161 476 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-201ENST00000373019 COX6B1P14854 86 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
SF3A3-201ENST00000373019 LYRM7Q5U5X0 104 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 Q8N8P6 123 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 IGHV3OR15-7A0A075B7D8 119 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 TEX49A0A1B0GTD5 131 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 M0R3E3 92 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 GLRXP35754 106 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 EFNA4P52798 201 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 FAM57AQ8TBR7 257 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 NTN5Q8WTR8 489 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-201ENST00000373019 RPUSD1Q9UJJ7 312 aaKnown RBP7.42□□□□□ -1.22
SF3A3-201ENST00000373019 SSUH2Q9Y2M2 353 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 NGBQ9NPG2 151 aa7.42□□□□□ -1.22
SF3A3-201ENST00000373019 IGHV3-21A0A0B4J1V1 117 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 F8VRH5 84 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 MYOZ3Q8TDC0 251 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 ONECUT1Q9UBC0 465 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 CCDC168Q8NDH2 2452 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 DUSP14O95147 198 aaKnown RBP7.41□□□□□ -1.22
SF3A3-201ENST00000373019 SRSF9Q13242 221 aaKnown RBP eCLIP7.41□□□□□ -1.22
SF3A3-201ENST00000373019 C10orf126Q8N4M7 172 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 PRR25Q96S07 402 aa7.41□□□□□ -1.22
SF3A3-201ENST00000373019 CSMD1Q96PZ7 3565 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 OOSP1A8MZH6 123 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 H7C1H1 209 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 Q0VFX4 171 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 PVRIGQ6DKI7 326 aa7.4□□□□□ -1.22
SF3A3-201ENST00000373019 DUX4L9Q6RFH8 374 aaPredicted RBP7.4□□□□□ -1.22
SF3A3-201ENST00000373019 FAM19A5Q7Z5A7 132 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms