RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 C16orf74Q96GX8 76 aa10.74□□□□□ -0.69
SS18L1-202ENST00000370848 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
SS18L1-202ENST00000370848 NIPSNAP3BQ9BS92 247 aa10.74□□□□□ -0.69
SS18L1-202ENST00000370848 TMEM167BQ9NRX6 74 aa10.74□□□□□ -0.69
SS18L1-202ENST00000370848 DEFB131BA0A096LNP1 70 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 MAP1LC3B2A6NCE7 125 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 PFDN1O60925 122 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 UBE2G2P60604 165 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 FAM74A1Q5RGS3 127 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
SS18L1-202ENST00000370848 MAP1LC3BQ9GZQ8 125 aa10.73□□□□□ -0.69
SS18L1-202ENST00000370848 C1QBP02746 253 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 HTN3P15516 51 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 DAD1P61803 113 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
SS18L1-202ENST00000370848 AKAP14Q86UN6 197 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 TMED6Q8WW62 240 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 TVP23CQ96ET8 276 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 FAM210BQ96KR6 192 aa10.72□□□□□ -0.69
SS18L1-202ENST00000370848 NOP10Q9NPE3 64 aaKnown RBP10.72□□□□□ -0.69
SS18L1-202ENST00000370848 TEX48A0A1B0GUV7 120 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 A0A1B0GV50 99 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 LYRM9A8MSI8 78 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 F6UZH7 168 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 TCRAP04437 139 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 NMBP08949 121 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 P0DMU3 169 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 FAM231AP0DMU4 169 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 FAM231CP0DMU5 169 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 POM121L12Q8N7R1 296 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 C5orf17Q8NAS9 161 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 PYGO2Q9BRQ0 406 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 TP53TG3Q9ULZ0 132 aa10.71□□□□□ -0.69
SS18L1-202ENST00000370848 TRBV7-9A0A0J9YWB2 115 aa10.7□□□□□ -0.7
SS18L1-202ENST00000370848 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
SS18L1-202ENST00000370848 CCDC28AQ8IWP9 274 aa10.7□□□□□ -0.7
SS18L1-202ENST00000370848 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
SS18L1-202ENST00000370848 A0A1W2PRE2 83 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 CBY3A6NI87 242 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 TPT1P13693 172 aaKnown RBP10.69□□□□□ -0.7
SS18L1-202ENST00000370848 LGALS9BQ3B8N2 356 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 MUC21Q5SSG8 566 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 ARL6IP6Q8N6S5 226 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 C11orf72Q8NBR9 251 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 STOML3Q8TAV4 291 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 LINC00467Q9BRT7 94 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 NDUFAF3Q9BU61 184 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 GSN-AS1Q9NRJ2 163 aa10.69□□□□□ -0.7
SS18L1-202ENST00000370848 TIMM8BQ9Y5J9 83 aaPredicted RBP10.69□□□□□ -0.7
SS18L1-202ENST00000370848 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 FAM74A7A6NL05 159 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 RGS13O14921 159 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 IGLV2-11P01706 119 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 EIF4E3Q8N5X7 224 aaKnown RBP10.68□□□□□ -0.7
SS18L1-202ENST00000370848 LINC00479Q96M42 142 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 C8orf49Q96NF6 230 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 LENEPQ9Y5L5 61 aa10.68□□□□□ -0.7
SS18L1-202ENST00000370848 TRAV34A0A0B4J273 112 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 RTL8CO15255 209 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
SS18L1-202ENST00000370848 ANXA2RQ3ZCQ2 193 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 Q6AWC8 147 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 C9orf62Q8N4C0 152 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 CYB561D1Q8N8Q1 229 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 SFT2D1Q8WV19 159 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 MBD3L1Q8WWY6 194 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 TREM1Q9NP99 234 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 PSG8Q9UQ74 426 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 KLF12Q9Y4X4 402 aa10.67□□□□□ -0.7
SS18L1-202ENST00000370848 SERTM2A0A1B0GWG4 89 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 SNURFLB1AK76 121 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 GAGE7O76087 117 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 IFNA7P01567 189 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 ATP5G3P48201 142 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 Q6ZR54 194 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 Q6ZTI0 123 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 PRNTQ86SH4 94 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 LINC00612Q8N6U2 182 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 ATG101Q9BSB4 218 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 NAGKQ9UJ70 344 aa10.66□□□□□ -0.7
SS18L1-202ENST00000370848 ABCA13Q86UQ4 5058 aa10.65□□□□□ -0.7
SS18L1-202ENST00000370848 PEX7O00628 323 aa10.65□□□□□ -0.7
SS18L1-202ENST00000370848 ZNF80P51504 273 aaPredicted RBP10.65□□□□□ -0.7
SS18L1-202ENST00000370848 FLI1Q01543 452 aaPredicted RBP10.65□□□□□ -0.7
SS18L1-202ENST00000370848 TMEM88Q6PEY1 159 aa10.65□□□□□ -0.7
SS18L1-202ENST00000370848 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
SS18L1-202ENST00000370848 ZNF680Q8NEM1 530 aa10.65□□□□□ -0.7
SS18L1-202ENST00000370848 F5H768 121 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 PAGE4O60829 102 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 H2AFB1P0C5Y9 115 aa10.64□□□□□ -0.71
SS18L1-202ENST00000370848 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms