RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 IGHV3-38A0A0C4DH36 116 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 DLEU1O43261 78 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 ZNF625Q96I27 306 aaPredicted RBP15.5■□□□□ 0.07
LMO4-202ENST00000370544 C17orf77Q96MU5 243 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 DENND4CQ5VZ89 1909 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 DOCK9Q9BZ29 2069 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 IGHV1-24A0A0C4DH33 117 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 Q6ZSR3 168 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 NEGR1Q7Z3B1 354 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 VWC2Q2TAL6 325 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 CD5LO43866 347 aa15.5■□□□□ 0.07
LMO4-202ENST00000370544 TRAV8-3A0A0A6YYJ7 113 aa15.49■□□□□ 0.07
LMO4-202ENST00000370544 ATP6V0BQ99437 205 aa15.49■□□□□ 0.07
LMO4-202ENST00000370544 TMEM243Q9BU79 118 aa15.49■□□□□ 0.07
LMO4-202ENST00000370544 SIGLEC8Q9NYZ4 499 aa15.49■□□□□ 0.07
LMO4-202ENST00000370544 CENPVL3A0A0U1RRI6 287 aa15.49■□□□□ 0.07
LMO4-202ENST00000370544 NPYP01303 97 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 IGHV4-61A0A0C4DH41 118 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 INS-IGF2F8WCM5 200 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 IGFBPL1Q8WX77 278 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 ANAPC13Q9BS18 74 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 HLA-DMBP28068 263 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 C20orf144Q9BQM9 153 aa15.48■□□□□ 0.07
LMO4-202ENST00000370544 DOCK7Q96N67 2140 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 FOXI2Q6ZQN5 318 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 DYNAPQ8N1N2 210 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 ZNF561-AS1K7EIQ3 104 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 NPBQ8NG41 125 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 ABCA4P78363 2273 aa15.47■□□□□ 0.07
LMO4-202ENST00000370544 K7EN84 100 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 SMIM2Q9BVW6 85 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 HOXD3P31249 432 aaPredicted RBP15.46■□□□□ 0.07
LMO4-202ENST00000370544 GAGE6Q13070 117 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 F8WEM9 126 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 HLA-DRB4P13762 266 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 HLA-DRB4X5D2U9 266 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 DEFB113Q30KQ7 82 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 Q6ZWC4 215 aa15.46■□□□□ 0.07
LMO4-202ENST00000370544 A0A1W2PNU3 283 aaPredicted RBP15.46■□□□□ 0.06
LMO4-202ENST00000370544 VWC2LB2RUY7 222 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 TSSC4Q9Y5U2 329 aaPredicted RBP15.45■□□□□ 0.06
LMO4-202ENST00000370544 PLXNB3Q9ULL4 1909 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 F6UB75 175 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 IGHV4-30-2A0A087WSY4 118 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 IGHV4-38-2P0DP08 117 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 UBE2V1Q13404 147 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 PYGO2Q9BRQ0 406 aa15.45■□□□□ 0.06
LMO4-202ENST00000370544 ADORA2A-AS1P86434 159 aa15.44■□□□□ 0.06
LMO4-202ENST00000370544 MRPL53Q96EL3 112 aaKnown RBP15.44■□□□□ 0.06
LMO4-202ENST00000370544 SRSF2Q01130 221 aaKnown RBP15.44■□□□□ 0.06
LMO4-202ENST00000370544 NBASA2RRP1 2371 aa15.44■□□□□ 0.06
LMO4-202ENST00000370544 LGALS9BQ3B8N2 356 aa15.44■□□□□ 0.06
LMO4-202ENST00000370544 LGALS9CQ6DKI2 356 aa15.44■□□□□ 0.06
LMO4-202ENST00000370544 SPRY4Q9C004 299 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 IGHV7-81A0A0B4J1V7 117 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 RBAKDNA6NC62 111 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 AGPAT4-IT1Q9H0P7 198 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 EREGO14944 169 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 NDUFS6O75380 124 aaKnown RBP15.43■□□□□ 0.06
LMO4-202ENST00000370544 RITA1Q96K30 269 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 KIF26AQ9ULI4 1882 aaPredicted RBP15.43■□□□□ 0.06
LMO4-202ENST00000370544 KLF12Q9Y4X4 402 aa15.43■□□□□ 0.06
LMO4-202ENST00000370544 C20orf78Q9BR46 151 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 PFN2P35080 140 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 PRB1P04280 392 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 HIST1H4AP62805 103 aaKnown RBP15.42■□□□□ 0.06
LMO4-202ENST00000370544 DNAJC30Q96LL9 226 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 C9JAW5 83 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 GAGE2BQ13066 116 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 GAGE2EQ4V326 116 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 CFHR4Q92496 578 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 GAGE2DQ9UEU5 116 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 I3L2K1 104 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 FOXE3Q13461 319 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 LYPD6BQ8NI32 183 aa15.42■□□□□ 0.06
LMO4-202ENST00000370544 DEFB136Q30KP8 78 aa15.41■□□□□ 0.06
LMO4-202ENST00000370544 SEM1Q6ZVN7 128 aa15.41■□□□□ 0.06
LMO4-202ENST00000370544 GNRH2O43555 120 aa15.41■□□□□ 0.06
LMO4-202ENST00000370544 MRPL35Q9NZE8 188 aaKnown RBP15.41■□□□□ 0.06
LMO4-202ENST00000370544 CCL24O00175 119 aa15.41■□□□□ 0.06
LMO4-202ENST00000370544 EGR2P11161 476 aaPredicted RBP15.41■□□□□ 0.06
LMO4-202ENST00000370544 LYPD6Q86Y78 171 aa15.4■□□□□ 0.06
LMO4-202ENST00000370544 COX11Q9Y6N1 276 aa15.4■□□□□ 0.06
LMO4-202ENST00000370544 CACNA1HO95180 2353 aa15.4■□□□□ 0.06
LMO4-202ENST00000370544 KLF2Q9Y5W3 355 aaPredicted RBP15.4■□□□□ 0.06
LMO4-202ENST00000370544 ZNF124Q15973 351 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 K7EIM0 57 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 OCIAD2Q56VL3 154 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 ZFAND6Q6FIF0 208 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 IGLV11-55A0A075B6I3 123 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 CDK2AP2O75956 126 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 IGF2BP2-AS1Q96M15 143 aa15.39■□□□□ 0.05
LMO4-202ENST00000370544 IGLC2P0DOY2 106 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 IGLC3P0DOY3 106 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 C10orf105Q8TEF2 133 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 NDUFA12Q9UI09 145 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 LENEPQ9Y5L5 61 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 A0A096LPF7 62 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 ADAMTSL5Q6ZMM2 481 aa15.38■□□□□ 0.05
LMO4-202ENST00000370544 WNK2Q9Y3S1 2297 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms