RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 PPIFP30405 207 aaKnown RBP13.48□□□□□ -0.25
CHUK-201ENST00000370397 APC2O95996 2303 aa13.48□□□□□ -0.25
CHUK-201ENST00000370397 IGHV4-4A0A075B6R2 117 aa13.48□□□□□ -0.25
CHUK-201ENST00000370397 RBAKDNA6NC62 111 aa13.48□□□□□ -0.25
CHUK-201ENST00000370397 SPAG8Q99932 426 aaPredicted RBP13.48□□□□□ -0.25
CHUK-201ENST00000370397 CEP250Q9BV73 2442 aa13.48□□□□□ -0.25
CHUK-201ENST00000370397 A0A087WX48 190 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 CLPSL1A2RUU4 121 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 ORM1P02763 201 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 PRSS1P07477 247 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 CD300EQ496F6 205 aaPredicted RBP13.47□□□□□ -0.25
CHUK-201ENST00000370397 TSSC4Q9Y5U2 329 aaPredicted RBP13.47□□□□□ -0.25
CHUK-201ENST00000370397 POLEQ07864 2286 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 RPL24P83731 157 aaKnown RBP13.47□□□□□ -0.25
CHUK-201ENST00000370397 GTSF1LQ9H1H1 148 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 ZFHX2Q9C0A1 2572 aaPredicted RBP13.47□□□□□ -0.25
CHUK-201ENST00000370397 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 MSRB2Q9Y3D2 182 aa13.47□□□□□ -0.25
CHUK-201ENST00000370397 GAGE12HA6NDE8 117 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 H3BMG7 143 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 MORN3Q6PF18 240 aaPredicted RBP13.46□□□□□ -0.25
CHUK-201ENST00000370397 RNF182Q8N6D2 247 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 DPM3Q9P2X0 92 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 GVINP1Q7Z2Y8 2422 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 TRAV26-2A0A0B4J265 109 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 CCDC144NLQ6NUI1 221 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 Q8NA96 180 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 ARPC1AQ92747 370 aa13.46□□□□□ -0.25
CHUK-201ENST00000370397 TRAV8-2A0A0B4J237 113 aa13.46□□□□□ -0.26
CHUK-201ENST00000370397 RNF223E7ERA6 249 aa13.46□□□□□ -0.26
CHUK-201ENST00000370397 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.46□□□□□ -0.26
CHUK-201ENST00000370397 KLRD1Q13241 179 aa13.46□□□□□ -0.26
CHUK-201ENST00000370397 SH2D6Q7Z4S9 175 aa13.46□□□□□ -0.26
CHUK-201ENST00000370397 BUB3O43684 328 aa13.45□□□□□ -0.26
CHUK-201ENST00000370397 INSL3P51460 131 aa13.45□□□□□ -0.26
CHUK-201ENST00000370397 B9A039 149 aa13.45□□□□□ -0.26
CHUK-201ENST00000370397 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
CHUK-201ENST00000370397 TMEM11P17152 192 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 ZNF479Q96JC4 524 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 SIGMAR1Q99720 223 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 LAGE3Q14657 143 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 IGHV3OR16-8A0A075B7F1 116 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 EBI3Q14213 229 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 RRN3P1Q2M238 152 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 AGPAT4-IT1Q9H0P7 198 aa13.44□□□□□ -0.26
CHUK-201ENST00000370397 TRAV12-1A0A0B4J245 112 aa13.43□□□□□ -0.26
CHUK-201ENST00000370397 EFNA4P52798 201 aa13.43□□□□□ -0.26
CHUK-201ENST00000370397 ONECUT1Q9UBC0 465 aa13.43□□□□□ -0.26
CHUK-201ENST00000370397 ZNF502Q8TBZ5 544 aa13.43□□□□□ -0.26
CHUK-201ENST00000370397 SMCPP49901 116 aaPredicted RBP13.42□□□□□ -0.26
CHUK-201ENST00000370397 IGHV7-81A0A0B4J1V7 117 aa13.42□□□□□ -0.26
CHUK-201ENST00000370397 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
CHUK-201ENST00000370397 ETDBQ3ZM63 59 aa13.42□□□□□ -0.26
CHUK-201ENST00000370397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.41□□□□□ -0.26
CHUK-201ENST00000370397 PLNP26678 52 aa13.41□□□□□ -0.26
CHUK-201ENST00000370397 CELSR1Q9NYQ6 3014 aa13.4□□□□□ -0.26
CHUK-201ENST00000370397 NEXN-AS1Q8NBZ9 246 aa13.4□□□□□ -0.26
CHUK-201ENST00000370397 PRR9Q5T870 116 aa13.4□□□□□ -0.26
CHUK-201ENST00000370397 CNOT1A5YKK6 2376 aaKnown RBP13.4□□□□□ -0.26
CHUK-201ENST00000370397 RIF1Q5UIP0 2472 aaKnown RBP13.4□□□□□ -0.26
CHUK-201ENST00000370397 COX6B1P14854 86 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 AJUBAQ96IF1 538 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 CENPVL3A0A0U1RRI6 287 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 F8VRH5 84 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 FHL3Q13643 280 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 IGHV3-35A0A0C4DH35 117 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 NDUFS8O00217 210 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 MTURNQ8N3F0 131 aa13.39□□□□□ -0.27
CHUK-201ENST00000370397 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 LGALS1P09382 135 aaKnown RBP13.38□□□□□ -0.27
CHUK-201ENST00000370397 C9orf47Q6ZRZ4 202 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 TOMM6Q96B49 74 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 MYMXA0A1B0GTQ4 84 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 PRTN3P24158 256 aa13.38□□□□□ -0.27
CHUK-201ENST00000370397 M0R1W7 72 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 CFAP126Q5VTH2 177 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 Q8N9W7 124 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 SH3BGRL2Q9UJC5 107 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 LY6HO94772 140 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 MYOZ3Q8TDC0 251 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 SMIM2Q9BVW6 85 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 RASL10AQ92737 203 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 CDIP1Q9H305 208 aa13.37□□□□□ -0.27
CHUK-201ENST00000370397 H7C1H1 209 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 NFE4Q86UQ8 179 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 U3KQE9 123 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 UBE2D1P51668 147 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 ATP5G2Q06055 141 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
CHUK-201ENST00000370397 ATP6V0BQ99437 205 aa13.36□□□□□ -0.27
CHUK-201ENST00000370397 HIST1H4GQ99525 98 aa13.35□□□□□ -0.27
CHUK-201ENST00000370397 SLC50A1Q9BRV3 221 aa13.35□□□□□ -0.27
CHUK-201ENST00000370397 HES1Q14469 280 aa13.35□□□□□ -0.27
CHUK-201ENST00000370397 PRR30Q53SZ7 412 aaPredicted RBP13.35□□□□□ -0.27
CHUK-201ENST00000370397 C15orf32Q32M92 178 aa13.34□□□□□ -0.27
CHUK-201ENST00000370397 MRAP2Q96G30 205 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms