RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 MAP1LC3BQ9GZQ8 125 aa15.9■□□□□ 0.14
ECHDC1-203ENST00000368291 IGHV4-4A0A075B6R2 117 aa15.89■□□□□ 0.13
ECHDC1-203ENST00000368291 A0A1W2PRE2 83 aa15.89■□□□□ 0.13
ECHDC1-203ENST00000368291 STOML3Q8TAV4 291 aa15.89■□□□□ 0.13
ECHDC1-203ENST00000368291 NOP10Q9NPE3 64 aaKnown RBP15.89■□□□□ 0.13
ECHDC1-203ENST00000368291 TCTAP57738 103 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 AKAP14Q86UN6 197 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 C11orf72Q8NBR9 251 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 SGK494Q96LW2 274 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 EPDR1Q9UM22 224 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 VPS13DQ5THJ4 4388 aa15.88■□□□□ 0.13
ECHDC1-203ENST00000368291 A0A1B0GVG6 124 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 UMAD1C9J7I0 102 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 DEFB130BP0DP73 79 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 DEFB130AP0DP74 79 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 TPT1P13693 172 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 UBE2G2P60604 165 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 EIF5AP63241 154 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 ANXA2RQ3ZCQ2 193 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 Q6AWC8 147 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 EIF4E3Q8N5X7 224 aaKnown RBP15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 SERTM2A0A1B0GWG4 89 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 FAM74A7A6NL05 159 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 IGLV2-11P01706 119 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 LINC00612Q8N6U2 182 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 MBD3L1Q8WWY6 194 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 TP53TG3Q9ULZ0 132 aa15.87■□□□□ 0.13
ECHDC1-203ENST00000368291 LY6G6CO95867 125 aa15.86■□□□□ 0.13
ECHDC1-203ENST00000368291 FAM213BQ8TBF2 198 aa15.86■□□□□ 0.13
ECHDC1-203ENST00000368291 IGHV1OR15-1A0A075B7D0 117 aa15.85■□□□□ 0.13
ECHDC1-203ENST00000368291 HTN3P15516 51 aa15.85■□□□□ 0.13
ECHDC1-203ENST00000368291 GSN-AS1Q9NRJ2 163 aa15.85■□□□□ 0.13
ECHDC1-203ENST00000368291 KMT2AQ03164 3969 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 CBY3A6NI87 242 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 SNURFLB1AK76 121 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 RGS13O14921 159 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 DAZ2Q13117 558 aaKnown RBP15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 LGALS9CQ6DKI2 356 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 DPPA3Q6W0C5 159 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 CYB561D1Q8N8Q1 229 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 ZNF680Q8NEM1 530 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 ATG101Q9BSB4 218 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 TREM1Q9NP99 234 aa15.84■□□□□ 0.13
ECHDC1-203ENST00000368291 F6UZH7 168 aa15.83■□□□□ 0.12
ECHDC1-203ENST00000368291 MUC21Q5SSG8 566 aa15.83■□□□□ 0.12
ECHDC1-203ENST00000368291 SFT2D1Q8WV19 159 aa15.83■□□□□ 0.12
ECHDC1-203ENST00000368291 LINC00479Q96M42 142 aa15.83■□□□□ 0.12
ECHDC1-203ENST00000368291 PSG8Q9UQ74 426 aa15.83■□□□□ 0.12
ECHDC1-203ENST00000368291 K7EQM0 130 aa15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 FLI1Q01543 452 aaPredicted RBP15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 IBA57Q5T440 356 aaKnown RBP15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 TMEM75Q8N9X5 138 aa15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 C8orf49Q96NF6 230 aa15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 KLF12Q9Y4X4 402 aa15.82■□□□□ 0.12
ECHDC1-203ENST00000368291 DNAH6Q9C0G6 4158 aa15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 TCL1AP56279 114 aa15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 C9orf62Q8N4C0 152 aa15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 FAM210BQ96KR6 192 aa15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 NDUFAF3Q9BU61 184 aa15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 NKX6-2Q9C056 277 aaPredicted RBP15.81■□□□□ 0.12
ECHDC1-203ENST00000368291 IFNA7P01567 189 aa15.8■□□□□ 0.12
ECHDC1-203ENST00000368291 Q6ZTI0 123 aa15.8■□□□□ 0.12
ECHDC1-203ENST00000368291 TRAV34A0A0B4J273 112 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 A0A1B0GV50 99 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 GAGE12BA1L429 117 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 PEX7O00628 323 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 GAGE7O76087 117 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 ATP5G1P05496 136 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 H2AFB1P0C5Y9 115 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 GAGE12FP0CL80 117 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 GAGE12GP0CL81 117 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 GAGE12IP0CL82 117 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 ATP5G3P48201 142 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 ZNF80P51504 273 aaPredicted RBP15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 TMEM88Q6PEY1 159 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 PRNTQ86SH4 94 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 SLC51BQ86UW2 128 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 ARL2-SNX15V9GYD0 113 aa15.79■□□□□ 0.12
ECHDC1-203ENST00000368291 TRAV21A0A0B4J279 112 aa15.78■□□□□ 0.12
ECHDC1-203ENST00000368291 TDRG1Q3Y452 100 aa15.78■□□□□ 0.12
ECHDC1-203ENST00000368291 NDFIP1Q9BT67 221 aa15.78■□□□□ 0.12
ECHDC1-203ENST00000368291 MDFICQ9P1T7 246 aa15.78■□□□□ 0.12
ECHDC1-203ENST00000368291 MUC4Q99102 2169 aa15.78■□□□□ 0.12
ECHDC1-203ENST00000368291 FBLL1A6NHQ2 334 aaKnown RBP15.77■□□□□ 0.12
ECHDC1-203ENST00000368291 SPINK4O60575 86 aa15.77■□□□□ 0.12
ECHDC1-203ENST00000368291 PAGE4O60829 102 aa15.77■□□□□ 0.12
ECHDC1-203ENST00000368291 FAM159AQ6UWV7 190 aa15.77■□□□□ 0.12
ECHDC1-203ENST00000368291 HIST1H2BAQ96A08 127 aa15.77■□□□□ 0.12
ECHDC1-203ENST00000368291 F5H768 121 aa15.76■□□□□ 0.11
ECHDC1-203ENST00000368291 SULT1A2P50226 295 aa15.76■□□□□ 0.11
ECHDC1-203ENST00000368291 ZFP69Q49AA0 526 aa15.76■□□□□ 0.11
ECHDC1-203ENST00000368291 CST9LP1Q5W188 147 aa15.76■□□□□ 0.11
ECHDC1-203ENST00000368291 C11orf21Q9P2W6 132 aa15.76■□□□□ 0.11
ECHDC1-203ENST00000368291 RAB5CP51148 216 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 TMEM183BQ1AE95 376 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 EIF5AL1Q6IS14 154 aaKnown RBP15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 TMEM183AQ8IXX5 376 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 C18orf15Q96N68 181 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 NAGKQ9UJ70 344 aa15.75■□□□□ 0.11
ECHDC1-203ENST00000368291 TRGV1A0A0A0MS02 117 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms