RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 HCP5Q6MZN7 132 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 DOCK3Q8IZD9 2030 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 SPINK14Q6IE38 97 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF788Q6ZQV5 615 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 SLX4Q8IY92 1834 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 NUP98P52948 1817 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 UFSP1Q6NVU6 142 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 AJUBAQ96IF1 538 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 TMUB1Q9BVT8 246 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 WISP1O95388 367 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 LYPD5Q6UWN5 251 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 FAM110DQ8TAY7 271 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-207ENST00000367255 A0A1W2PQF6 199 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 ABCA2Q9BZC7 2435 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 DENND4AQ7Z401 1863 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 PRIMA1Q86XR5 153 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 FANCD2OSQ96PS1 177 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 MYO16Q9Y6X6 1858 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFA4L2Q9NRX3 87 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 ELANEP08246 267 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 FGF6P10767 208 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFA11Q86Y39 141 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 C1orf147Q96MC9 270 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-207ENST00000367255 CXCL13O43927 109 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 C12orf74Q32Q52 190 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 PIGYQ3MUY2 71 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF833PQ6ZTB9 187 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 FRMD6-AS1P0C7T7 363 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 UBE2D2P62837 147 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 COX7CP15954 63 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 DOCK1Q14185 1865 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NUPR1O60356 82 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFA3O95167 84 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 OCC1Q8TAD7 63 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 IGHV4-39P01824 125 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 PIP4P1Q86T03 277 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 INSL3P51460 131 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
SYNE1-207ENST00000367255 FAM30AQ9NZY2 134 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFS5O43920 106 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NHSQ6T4R5 1651 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 Q6JHZ5 121 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 NPBQ8NG41 125 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 IMMP1LQ96LU5 166 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 SCN8AQ9UQD0 1980 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 SHANK1Q9Y566 2161 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 SDK2Q58EX2 2172 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 SMCHD1A6NHR9 2005 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 TRBV6-5A0A0K0K1A5 114 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 IGLL5B9A064 214 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 TRBV12-3P01733 135 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
SYNE1-207ENST00000367255 USP17L23D6RBM5 183 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 TIRAPP58753 221 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 TINCRA0A1B0GVN0 87 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 C9JAW5 83 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 VSIRQ9H7M9 311 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV3D-20A0A0C4DH25 116 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 PLA2G2EQ9NZK7 142 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 C2orf66Q6UXQ4 117 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 TRAV12-3A0A0B4J271 114 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 C11orf1Q9H5F2 150 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 JPT2Q9H910 190 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 RPL18AQ02543 176 aaKnown RBP2.98□□□□□ -1.93
SYNE1-207ENST00000367255 SAP25Q8TEE9 199 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF501Q96CX3 271 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-207ENST00000367255 XAGE1AQ9HD64 81 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 INSP01308 110 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 PAX8Q06710 450 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 TRAV23DV6A0A075B6W5 121 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 MSGN1A6NI15 193 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 D6R8Y8 96 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 NAV1Q8NEY1 1877 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 DEFB109BQ30KR1 87 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 IGLV3-9A0A075B6K5 115 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 MSMBP08118 114 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 DOCK6Q96HP0 2047 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 UBE2D1P51668 147 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF672Q499Z4 452 aaPredicted RBP2.98□□□□□ -1.93
SYNE1-207ENST00000367255 RALGAPA2Q2PPJ7 1873 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV1-9A0A0C4DH69 117 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 CD28P10747 220 aa2.98□□□□□ -1.93
SYNE1-207ENST00000367255 TRAV24A0A0B4J272 114 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CHD5Q8TDI0 1954 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 SCO2A0A1W2PP80 73 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 NPFFO15130 113 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 NXPH4O95158 308 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 NRAPQ86VF7 1730 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 TAF1LQ8IZX4 1826 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 IGLL1P15814 213 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ARFGEF2Q9Y6D5 1785 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 ELOF1P60002 83 aaKnown RBP2.97□□□□□ -1.93
SYNE1-207ENST00000367255 KHDC1LQ5JSQ8 128 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 CELA3BP08861 270 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 Q6ZRM9 215 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 NRGNQ92686 78 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 PAPPA2Q9BXP8 1791 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 KIF13BQ9NQT8 1826 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 MGAMO43451 1857 aa2.97□□□□□ -1.93
SYNE1-207ENST00000367255 LOXP28300 417 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms