RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C1orf122Q6ZSJ8 110 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TEX48A0A1B0GUV7 120 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 NPYP01303 97 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 RPL7P18124 248 aaKnown RBP11.42□□□□□ -0.58
PRKN-204ENST00000366896 HES1Q14469 280 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
PRKN-204ENST00000366896 TMSB15BA0A087X1C1 80 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 FXYD2P54710 66 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 NDPQ00604 133 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 EBI3Q14213 229 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 PSMG4Q5JS54 123 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 CCDC144NLQ6NUI1 221 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 RPL24P83731 157 aaKnown RBP11.41□□□□□ -0.58
PRKN-204ENST00000366896 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
PRKN-204ENST00000366896 SCGB1A1P11684 91 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 GCSHP23434 173 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 CKS2P33552 79 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 Q8N6K4 173 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 ZMAT4Q9H898 229 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.58
PRKN-204ENST00000366896 SH2D1AO60880 128 aa11.4□□□□□ -0.59
PRKN-204ENST00000366896 PHLDA1Q8WV24 401 aaPredicted RBP11.4□□□□□ -0.59
PRKN-204ENST00000366896 VGLL1Q99990 258 aa11.4□□□□□ -0.59
PRKN-204ENST00000366896 NBPF19A0A087WUL8 3843 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2-40A0A087WW87 121 aaPredicted RBP11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2D-26A0A0A0MRZ7 120 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 SMKR1H3BMG3 65 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 IGKV2D-40P01614 121 aaPredicted RBP11.39□□□□□ -0.59
PRKN-204ENST00000366896 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 KLK9Q9UKQ9 250 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 HHLA3Q9XRX5 114 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 BMI1P35226 326 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 ATP5J2P56134 94 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 MINOS1Q5TGZ0 78 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 PRR25Q96S07 402 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 MINOS1-NBL1R4GNA1 71 aa11.39□□□□□ -0.59
PRKN-204ENST00000366896 LINC01546A6NGU7 62 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 ODF1Q14990 250 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 AZU1P20160 251 aa11.38□□□□□ -0.59
PRKN-204ENST00000366896 CENPEQ02224 2701 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 IGFL4Q6B9Z1 124 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 K7ERJ3 54 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 IGLC6P0CF74 106 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 Q8TAT8 98 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 SIGMAR1Q99720 223 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 TM2D2Q9BX73 214 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 TTTY13Q9BZ97 58 aa11.37□□□□□ -0.59
PRKN-204ENST00000366896 SVEP1Q4LDE5 3571 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 NCBP2LA6PVI3 153 aaKnown RBP11.36□□□□□ -0.59
PRKN-204ENST00000366896 TWIST1Q15672 202 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 CTSGP08311 255 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DMBP28068 263 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 RAB9AP51151 201 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 GTSF1LQ9H1H1 148 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 MAP1LC3AQ9H492 121 aa11.36□□□□□ -0.59
PRKN-204ENST00000366896 ABCA12Q86UK0 2595 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 EVI2AP22794 236 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 FCER1GP30273 86 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 FOXI2Q6ZQN5 318 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 BPESC1Q9GZL8 116 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 BEX4Q9NWD9 120 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 SMPXQ9UHP9 88 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 E9PLD3 99 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 NDUFS8O00217 210 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 IGKCP01834 107 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 CD300EQ496F6 205 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 VMO1Q7Z5L0 202 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 CEND1Q8N111 149 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
PRKN-204ENST00000366896 SPANXB1Q9NS25 103 aaPredicted RBP11.35□□□□□ -0.59
PRKN-204ENST00000366896 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 F8W1H4 67 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 IGHG4P01861 327 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 LEPP41159 167 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 C10orf105Q8TEF2 133 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
PRKN-204ENST00000366896 SMAD5-AS1Q9Y6J3 95 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 DEFB113Q30KQ7 82 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 TSSC4Q9Y5U2 329 aaPredicted RBP11.34□□□□□ -0.59
PRKN-204ENST00000366896 POLQO75417 2590 aa11.34□□□□□ -0.59
PRKN-204ENST00000366896 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
PRKN-204ENST00000366896 RBAKDNA6NC62 111 aa11.33□□□□□ -0.6
PRKN-204ENST00000366896 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms