RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 TCTEX1D1Q8N7M0 179 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 PYDC1Q8WXC3 89 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 C19orf12Q9NSK7 152 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 SPANXCQ9NY87 97 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 PTPRDP23468 1912 aa0.83□□□□□ -2.28
RNU6-28P-201ENST00000362378 SNRNP200O75643 2136 aaKnown RBP0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 SULT1C4O75897 302 aa0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 SLC25A5P05141 298 aaKnown RBP0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 RPL37AP61513 92 aaKnown RBP0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 C10orf111Q8N326 155 aa0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 AP1S3Q96PC3 154 aa0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 JPT1Q9UK76 154 aa0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 XIRP1Q702N8 1843 aaKnown RBP0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 WDR97A6NE52 1622 aa0.82□□□□□ -2.28
RNU6-28P-201ENST00000362378 LOC107984156A0A0G2JMH3 177 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 BBIP1A8MTZ0 92 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 SCTP09683 121 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 SCGB1A1P11684 91 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 SDC4P31431 198 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 ARL17AQ8IVW1 177 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 CTTNBP2Q8WZ74 1663 aa0.81□□□□□ -2.28
RNU6-28P-201ENST00000362378 ASCC3Q8N3C0 2202 aaKnown RBP0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 BORCS7-ASMTA0A0B4J1R7 106 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 A0A1W2PPB8 328 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 A0A1W2PRS3 328 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 ZNF727A8MUV8 499 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 KIR3DP1A8MWS1 328 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 EDF1O60869 148 aaKnown RBP0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 TNFSF15O95150 251 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 TCRAP04437 139 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 GTF2A1P52655 376 aaPredicted RBP0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 PSPHP78330 225 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 Q6ZQY7 126 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 C3orf62Q6ZUJ4 267 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 OTOSQ8NHW6 89 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 CITO14578 2027 aa0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.8□□□□□ -2.28
RNU6-28P-201ENST00000362378 ZFC3H1O60293 1989 aaKnown RBP0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 TANC2Q9HCD6 1990 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 FANCMQ8IYD8 2048 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 TRBV30A0A0K0K1B3 111 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 TMEM189A5PLL7 270 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 C9JAW5 83 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 K7EIL1 84 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 GYPBP06028 91 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 PAEPP09466 180 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 CKS2P33552 79 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 CCDC153Q494R4 210 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 HSD17B12Q53GQ0 312 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 CSAG1Q6PB30 78 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 TCTE3Q8IZS6 198 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 SMIM7Q9BQ49 75 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 AIF1LQ9BQI0 150 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 HIGD1AQ9Y241 93 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 MUC4Q99102 2169 aa0.79□□□□□ -2.28
RNU6-28P-201ENST00000362378 PNMA8CA0A1B0GUJ8 204 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 A0A1B0GW64 132 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 NUPR2A6NF83 97 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 MT-ND4LP03901 98 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 QRFPP83859 136 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 OR8J3Q8NGG0 315 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 CCL19Q99731 98 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 METTL1Q9UBP6 276 aaKnown RBP0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 ARHGAP31Q2M1Z3 1444 aa0.78□□□□□ -2.28
RNU6-28P-201ENST00000362378 ANK1P16157 1881 aa0.78□□□□□ -2.29
RNU6-28P-201ENST00000362378 ZGRF1Q86YA3 2104 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 MED12Q93074 2177 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 IGHV1-24A0A0C4DH33 117 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 OR2H2O95918 312 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 IGF2P01344 180 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 DBIP07108 87 aaKnown RBP0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 HIST1H1BP16401 226 aaKnown RBP0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 CMPK1P30085 196 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 PCBD1P61457 104 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 SNRPD3P62318 126 aaKnown RBP0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 MORN2Q502X0 79 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 TMEM244Q5VVB8 128 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 DEFB132Q7Z7B7 95 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 ATOH7Q8N100 152 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 PTPRGP23470 1445 aa0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
RNU6-28P-201ENST00000362378 CDC42EP2O14613 210 aa0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 XAF1Q6GPH4 301 aa0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 TMEM91Q6ZNR0 172 aa0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 OR4S1Q8NGB4 309 aa0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 MAGOHBQ96A72 148 aaKnown RBP0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 MRPL35Q9NZE8 188 aaKnown RBP0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 CALML5Q9NZT1 146 aa0.76□□□□□ -2.29
RNU6-28P-201ENST00000362378 KDM5CP41229 1560 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 TMEM30CPA0ZSE6 113 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 CD3DP04234 171 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 RHOHQ15669 191 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 IDO2Q6ZQW0 420 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 Q6ZS92 163 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 Q86TA4 180 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 MRPL36Q9P0J6 103 aaKnown RBP0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 COMMD3Q9UBI1 195 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 FBN2P35556 2912 aa0.75□□□□□ -2.29
RNU6-28P-201ENST00000362378 HLA-DRB4P13762 266 aa0.74□□□□□ -2.29
RNU6-28P-201ENST00000362378 ADCYAP1P18509 176 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms