RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 OR2T8A6NH00 312 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 SIVA1O15304 175 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 PPBPP02775 128 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 GATA3P23771 443 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 NDPQ00604 133 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 TWIST1Q15672 202 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 KLK9Q2XQG4 91 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 AMMECR1LQ6DCA0 310 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 VGLL1Q99990 258 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 KLK9Q9UKQ9 250 aa9.6□□□□□ -0.87
UBA3-202ENST00000361055 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 CBY3A6NI87 242 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 FABP5P3A8MUU1 101 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 PCP4P48539 62 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
UBA3-202ENST00000361055 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 HIF1ANQ9NWT6 349 aa9.59□□□□□ -0.87
UBA3-202ENST00000361055 PEF1Q9UBV8 284 aaKnown RBP9.59□□□□□ -0.87
UBA3-202ENST00000361055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■■ 38.3
UBA3-202ENST00000361055 A0A1W2PRD5 423 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 A0A1W2PRF3 423 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 A0A1W2PRM7 423 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 RAB9AP51151 201 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 ANKRD39Q53RE8 183 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 DYNAPQ8N1N2 210 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 IFI27L1Q96BM0 104 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 IGHV4-31P0DP07 118 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 OR9G4Q8NGQ1 327 aa9.58□□□□□ -0.88
UBA3-202ENST00000361055 ZNF469Q96JG9 3925 aaPredicted RBP9.58□□□□□ -0.88
UBA3-202ENST00000361055 IGHV7-81A0A0B4J1V7 117 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 RBAKDNA6NC62 111 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 NPYP01303 97 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 IGHV3-23P01764 117 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 AKAP9Q99996 3911 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 TGFAP01135 160 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 ORM1P02763 201 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 TMEM11P17152 192 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 CACNG7P62955 275 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 FOXE3Q13461 319 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 PIFOQ8TCI5 191 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
UBA3-202ENST00000361055 MAP1AP78559 2803 aaPredicted RBP9.56□□□□□ -0.88
UBA3-202ENST00000361055 C7orf71A4D174 169 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
UBA3-202ENST00000361055 SNAI2O43623 268 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 UBE2E1P51965 193 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 ERASQ7Z444 233 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 Q8N9W7 124 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 OR4X2Q8NGF9 303 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 Q8TAT8 98 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 TRAV8-6A0A0B4J262 113 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 A6NDN8 102 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 SMKR1H3BMG3 65 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 H3BRM9 83 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 J3QLI3 93 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 FAM110DQ8TAY7 271 aaPredicted RBP9.56□□□□□ -0.88
UBA3-202ENST00000361055 ZNF502Q8TBZ5 544 aa9.56□□□□□ -0.88
UBA3-202ENST00000361055 BUB3O43684 328 aa9.55□□□□□ -0.88
UBA3-202ENST00000361055 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
UBA3-202ENST00000361055 FCER1GP30273 86 aa9.55□□□□□ -0.88
UBA3-202ENST00000361055 IGFL4Q6B9Z1 124 aa9.55□□□□□ -0.88
UBA3-202ENST00000361055 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
UBA3-202ENST00000361055 NXT2Q9NPJ8 142 aaKnown RBP9.55□□□□□ -0.88
UBA3-202ENST00000361055 HSD52Q0P140 79 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 MSRB1Q9NZV6 116 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 SVEP1Q4LDE5 3571 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 CCDC168Q8NDH2 2452 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 CENPVL3A0A0U1RRI6 287 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 FXYD7P58549 80 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 ZMAT4Q9H898 229 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 ZFAND3Q9H8U3 227 aa9.54□□□□□ -0.88
UBA3-202ENST00000361055 FLNBO75369 2602 aaKnown RBP9.53□□□□□ -0.88
UBA3-202ENST00000361055 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 CLEC3BP05452 202 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 ERCC8Q13216 396 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 ADAMTSL5Q6ZMM2 481 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 TRAV40A0A0B4J280 105 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 GAGE12BA1L429 117 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 PRAC2D3DTV9 90 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 TNFRSF6BO95407 300 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.53□□□□□ -0.88
UBA3-202ENST00000361055 IGHV1-69DA0A0B4J2H0 117 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 GAGE10A6NGK3 116 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 NPFFO15130 113 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 AVPP01185 164 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 IGHV1-69P01742 117 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 LEPP41159 167 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.89
UBA3-202ENST00000361055 DKK2Q9UBU2 259 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 ITPR3Q14573 2671 aa9.52□□□□□ -0.89
UBA3-202ENST00000361055 PRSS47A8MTI9 375 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms