RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 REC114Q7Z4M0 266 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 KIR2DL5AQ8N109 375 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 TEX29Q8N6K0 151 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 OR10J6PQ8NGY7 276 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 C20orf173Q96LM9 149 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 CNFNQ9BYD5 112 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 RNF114Q9Y508 228 aa13.92□□□□□ -0.18
PDLIM7-203ENST00000359895 POLQO75417 2590 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 TMEM213A2RRL7 107 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 TM4SF20Q53R12 229 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 KRTAP1-3Q8IUG1 177 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 CSMD1Q96PZ7 3565 aa13.91□□□□□ -0.18
PDLIM7-203ENST00000359895 FAM181BA6NEQ2 426 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 RPL11P62913 178 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 TWIST1Q15672 202 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 Q8N976 141 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 VAMP8Q9BV40 100 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 ZNF702PQ9H963 129 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 U3KQK5 164 aa13.9□□□□□ -0.18
PDLIM7-203ENST00000359895 HOXA3O43365 443 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-203ENST00000359895 OR5AL1P0C617 328 aa13.89□□□□□ -0.19
PDLIM7-203ENST00000359895 ZNF575Q86XF7 245 aa13.89□□□□□ -0.19
PDLIM7-203ENST00000359895 MYOZ3Q8TDC0 251 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 C20orf144Q9BQM9 153 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 NDUFAF3Q9BU61 184 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 TMEM191AQ9H0A3 160 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 NOTCH2Q04721 2471 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 TRBV7-9A0A0J9YWB2 115 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 LGALS1P09382 135 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 BTF3P20290 206 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 ID1P41134 155 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 ORMDL3Q8N138 153 aa13.88□□□□□ -0.19
PDLIM7-203ENST00000359895 IGKV3D-20A0A0C4DH25 116 aa13.87□□□□□ -0.19
PDLIM7-203ENST00000359895 IGHV1-24A0A0C4DH33 117 aa13.87□□□□□ -0.19
PDLIM7-203ENST00000359895 RPLP1P05386 114 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-203ENST00000359895 C14orf144Q96I85 54 aa13.87□□□□□ -0.19
PDLIM7-203ENST00000359895 M0QZ24 198 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 PMCHL1Q16048 86 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 MRPL51Q4U2R6 128 aaKnown RBP13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 C10orf99Q6UWK7 81 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 AMN1Q8IY45 258 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 RNF152Q8N8N0 203 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 PRELID3AQ96N28 172 aa13.86□□□□□ -0.19
PDLIM7-203ENST00000359895 C2orf70A6NJV1 201 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 D6R8Y8 96 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 EBLN2Q6P2I7 272 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 FA2HQ7L5A8 372 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 Q8N2B8 174 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 OR8A1Q8NGG7 326 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 PRSS3P2Q8NHM4 247 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 C11orf21Q9P2W6 132 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 TEX15Q9BXT5 2789 aa13.85□□□□□ -0.19
PDLIM7-203ENST00000359895 PDZD2O15018 2839 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 MUC21A0A0G2JKD1 596 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 MUC21A0A140T8X8 626 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 LGALS9O00182 355 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 LEPROTL1O95214 131 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 PPBPP02775 128 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 CSN3P07498 182 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 SSTP61278 116 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 MUC21Q5SSG8 566 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 TMEM86BQ8N661 226 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 TMEM70Q9BUB7 260 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 AP5S1Q9NUS5 200 aa13.84□□□□□ -0.19
PDLIM7-203ENST00000359895 TRAV21A0A0B4J279 112 aa13.83□□□□□ -0.19
PDLIM7-203ENST00000359895 CACNG7P62955 275 aa13.83□□□□□ -0.19
PDLIM7-203ENST00000359895 FAM19A4Q96LR4 140 aa13.83□□□□□ -0.19
PDLIM7-203ENST00000359895 PAM16Q9Y3D7 125 aa13.83□□□□□ -0.19
PDLIM7-203ENST00000359895 CKS2P33552 79 aa13.83□□□□□ -0.2
PDLIM7-203ENST00000359895 TDRG1Q3Y452 100 aa13.83□□□□□ -0.2
PDLIM7-203ENST00000359895 ZFAND2AQ8N6M9 145 aa13.83□□□□□ -0.2
PDLIM7-203ENST00000359895 HSPB8Q9UJY1 196 aa13.83□□□□□ -0.2
PDLIM7-203ENST00000359895 LAMTOR2Q9Y2Q5 125 aa13.83□□□□□ -0.2
PDLIM7-203ENST00000359895 SNAI2O43623 268 aa13.82□□□□□ -0.2
PDLIM7-203ENST00000359895 SMIM15Q7Z3B0 74 aa13.82□□□□□ -0.2
PDLIM7-203ENST00000359895 APRG1Q8IVJ8 170 aa13.82□□□□□ -0.2
PDLIM7-203ENST00000359895 IGKV3-7A0A075B6H7 116 aa13.81□□□□□ -0.2
PDLIM7-203ENST00000359895 PRR9Q5T870 116 aa13.81□□□□□ -0.2
PDLIM7-203ENST00000359895 DCANP1Q8TF63 244 aa13.81□□□□□ -0.2
PDLIM7-203ENST00000359895 VPS13CQ709C8 3753 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 C20orf202A1L168 122 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 CRXO43186 299 aaPredicted RBP13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 OR10AG1Q8NH19 301 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 RNF185Q96GF1 192 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 MIEN1Q9BRT3 115 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 SIGLEC8Q9NYZ4 499 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 MSRB1Q9NZV6 116 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 AKAP9Q99996 3911 aa13.8□□□□□ -0.2
PDLIM7-203ENST00000359895 IGHV4OR15-8A0A075B7B6 117 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 A0A087WW49 117 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 LBHQ53QV2 105 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 MAP1LC3CQ9BXW4 147 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 SYS1-DBNDD2H3BUS1 97 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 EDN2P20800 178 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 IFI27P40305 119 aaPredicted RBP13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
PDLIM7-203ENST00000359895 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms