RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 PTPN13Q12923 2485 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 FAM90A27PA6NNH2 459 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 FCN3O75636 299 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 EMP1P54849 157 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
C2CD4A-201ENST00000355522 SCGB1A1P11684 91 aa12.73□□□□□ -0.37
C2CD4A-201ENST00000355522 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
C2CD4A-201ENST00000355522 LINC01549A6NIU2 74 aa12.73□□□□□ -0.37
C2CD4A-201ENST00000355522 ANAPC13Q9BS18 74 aa12.73□□□□□ -0.37
C2CD4A-201ENST00000355522 ATP5LO75964 103 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 MT-ATP8P03928 68 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 CSMD2Q7Z408 3487 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 WI2-2373I1.2A0A1W2PRP0 233 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 E9PLD3 99 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 ZNF80P51504 273 aaPredicted RBP12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 C3orf36Q3SXR2 165 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 RAXQ9Y2V3 346 aa12.72□□□□□ -0.37
C2CD4A-201ENST00000355522 GRNP28799 593 aaKnown RBP12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 GFRALQ6UXV0 394 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 PRR25Q96S07 402 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 VPS13CQ709C8 3753 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 CRYGCP07315 174 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 RPL7P18124 248 aaKnown RBP12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 ADIPOQQ15848 244 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 CTSZQ9UBR2 303 aa12.71□□□□□ -0.37
C2CD4A-201ENST00000355522 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.38
C2CD4A-201ENST00000355522 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.38
C2CD4A-201ENST00000355522 ZNF491Q8N8L2 437 aa12.71□□□□□ -0.38
C2CD4A-201ENST00000355522 A0A0G2JNJ9 132 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 HLA-DRB4P13762 266 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 TMEM30BQ3MIR4 351 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 TMEM14CQ9P0S9 112 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 Q9UFV3 132 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 HLA-DRB4X5D2U9 266 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 ACACBO00763 2458 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 MGPP08493 103 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 PRTN3P24158 256 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 ZNF493Q6ZR52 646 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 C8orf86Q6ZUL3 223 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 RNF182Q8N6D2 247 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 SCGB3A1Q96QR1 104 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 HHLA3Q9XRX5 114 aa12.7□□□□□ -0.38
C2CD4A-201ENST00000355522 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 FABP5P3A8MUU1 101 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 C16orf97H3BN30 126 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 DTX2Q86UW9 622 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 C17orf100A8MU93 164 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 PRSS33Q8NF86 280 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 H3BRN7 92 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 M0R381 172 aa12.69□□□□□ -0.38
C2CD4A-201ENST00000355522 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 TRGV3P03979 118 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 KLRD1Q13241 179 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 LAGE3Q14657 143 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 DLX4Q92988 240 aaPredicted RBP12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 RNF183Q96D59 192 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 HRNRQ86YZ3 2850 aaPredicted RBP12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 Q1RN00 199 aa12.68□□□□□ -0.38
C2CD4A-201ENST00000355522 VSTM5A8MXK1 200 aa12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 GATA4P43694 442 aa12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 FOXI1Q12951 378 aa12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 C2CD3Q4AC94 2353 aa12.67□□□□□ -0.38
C2CD4A-201ENST00000355522 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 B5MCH6 92 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 MFAP4P55083 255 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 I3L2K1 104 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 TIMM23O14925 209 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 BEX4Q9NWD9 120 aaPredicted RBP12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 IGKV3-7A0A075B6H7 116 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 MYO9AB2RTY4 2548 aa12.66□□□□□ -0.38
C2CD4A-201ENST00000355522 INS-IGF2F8WCM5 200 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 FOXC1Q12948 553 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 PVRIGQ6DKI7 326 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 C1orf122Q6ZSJ8 110 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 IL17RELQ6ZVW7 336 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 SMPXQ9UHP9 88 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 TMEM238LA0A1B0GVL6 79 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 A6NJY4 79 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 TEX22C9J3V5 150 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 GATA3P23771 443 aa12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 MBD3L2Q8NHZ7 208 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
C2CD4A-201ENST00000355522 TMEM178BH3BS89 294 aa12.65□□□□□ -0.39
C2CD4A-201ENST00000355522 K7EIM0 57 aa12.65□□□□□ -0.39
C2CD4A-201ENST00000355522 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms