RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 WT1-ASQ06250 92 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 CASP8AP2Q9UKL3 1982 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 DUX4L9Q6RFH8 374 aaPredicted RBP11.8□□□□□ -0.52
LMX1B-201ENST00000355497 SLC25A29Q8N8R3 303 aa11.8□□□□□ -0.52
LMX1B-201ENST00000355497 CR1LQ2VPA4 569 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 FOXI2Q6ZQN5 318 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 FHL1Q13642 323 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 AMTNQ6UX39 209 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 HERV-K104P63124 156 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 Q6ZR03 302 aa11.79□□□□□ -0.52
LMX1B-201ENST00000355497 IGHV4-28A0A0C4DH34 117 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 ACYP1P07311 99 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 FUSP35637 526 aaKnown RBP eCLIP11.78□□□□□ -0.52
LMX1B-201ENST00000355497 MP68P56378 58 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 CRIPAKQ8N1N5 446 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 Q9H8V8 135 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 PRR30Q53SZ7 412 aaPredicted RBP11.78□□□□□ -0.52
LMX1B-201ENST00000355497 B5MCH6 92 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 PKIGQ9Y2B9 76 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 NOP10Q9NPE3 64 aaKnown RBP11.78□□□□□ -0.52
LMX1B-201ENST00000355497 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
LMX1B-201ENST00000355497 FAM120AOSQ5T036 256 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 ASPHD1Q5U4P2 390 aa11.78□□□□□ -0.52
LMX1B-201ENST00000355497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.52
LMX1B-201ENST00000355497 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.52
LMX1B-201ENST00000355497 K7EMI3 77 aa11.77□□□□□ -0.52
LMX1B-201ENST00000355497 IGLC1P0CG04 106 aa11.77□□□□□ -0.52
LMX1B-201ENST00000355497 ZMAT4Q9H898 229 aa11.77□□□□□ -0.52
LMX1B-201ENST00000355497 ELANEP08246 267 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 H3BUA1 57 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 A0A0J9YY99 117 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 TEX48A0A1B0GUV7 120 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 IGHV2-5P01817 119 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 C15orf65H3BRN8 121 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 C14orf132Q9NPU4 83 aa11.77□□□□□ -0.53
LMX1B-201ENST00000355497 Q6ZQT7 251 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 C8orf31Q8N9H6 132 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 U3KQE9 123 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 ETDCA0A1B0GVM5 59 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 PRSS47A8MTI9 375 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 GNRH2O43555 120 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 CABIN1Q9Y6J0 2220 aa11.76□□□□□ -0.53
LMX1B-201ENST00000355497 NDUFB1O75438 58 aa11.75□□□□□ -0.53
LMX1B-201ENST00000355497 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
LMX1B-201ENST00000355497 RBAKDNA6NC62 111 aa11.75□□□□□ -0.53
LMX1B-201ENST00000355497 K7EN84 100 aa11.75□□□□□ -0.53
LMX1B-201ENST00000355497 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
LMX1B-201ENST00000355497 TRAV4A0A0B4J268 109 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 SEC61GP60059 68 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 ESPL1Q14674 2120 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 IGLV3-9A0A075B6K5 115 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 K7ENP7 123 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 WIPF2Q8TF74 440 aaPredicted RBP11.74□□□□□ -0.53
LMX1B-201ENST00000355497 IGLC7A0M8Q6 106 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 BUB3O43684 328 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 LINC01545Q5VT33 79 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
LMX1B-201ENST00000355497 A0A1B0GX51 115 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 DIAPH2-AS1Q14236 149 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 CCL25O15444 150 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 PSMB8P28062 276 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 FOXE3Q13461 319 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 GREB1Q4ZG55 1949 aa11.73□□□□□ -0.53
LMX1B-201ENST00000355497 C17orf77Q96MU5 243 aa11.72□□□□□ -0.53
LMX1B-201ENST00000355497 TIRAPP58753 221 aa11.72□□□□□ -0.53
LMX1B-201ENST00000355497 C1orf147Q96MC9 270 aaPredicted RBP11.72□□□□□ -0.53
LMX1B-201ENST00000355497 Q9HAA7 133 aa11.72□□□□□ -0.53
LMX1B-201ENST00000355497 KIF26BQ2KJY2 2108 aa11.72□□□□□ -0.53
LMX1B-201ENST00000355497 A0A0B4J2C4 111 aa11.72□□□□□ -0.53
LMX1B-201ENST00000355497 CACNA1IQ9P0X4 2223 aa11.71□□□□□ -0.53
LMX1B-201ENST00000355497 GREB1LQ9C091 1923 aaPredicted RBP11.71□□□□□ -0.53
LMX1B-201ENST00000355497 J3KT08 172 aa11.71□□□□□ -0.53
LMX1B-201ENST00000355497 ARHGEF17Q96PE2 2063 aaPredicted RBP11.71□□□□□ -0.54
LMX1B-201ENST00000355497 ETV2O00321 342 aaPredicted RBP11.71□□□□□ -0.54
LMX1B-201ENST00000355497 HOXB4P17483 251 aaPredicted RBP11.71□□□□□ -0.54
LMX1B-201ENST00000355497 PRR20EP86478 221 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 PRR20CP86479 221 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 PRR20DP86480 221 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 PRR20BP86481 221 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 PRR20AP86496 221 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 ZNF503Q96F45 646 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 VSIG2Q96IQ7 327 aa11.71□□□□□ -0.54
LMX1B-201ENST00000355497 APC2O95996 2303 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 PCP2Q8IVA1 136 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 FREM3P0C091 2139 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 CAMK2N2Q96S95 79 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 AGPAT4-IT1Q9H0P7 198 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 MPDZO75970 2070 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 LCTP09848 1927 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 ZFP2Q6ZN57 461 aa11.7□□□□□ -0.54
LMX1B-201ENST00000355497 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms