RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 SH2D1AO60880 128 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 ELOBQ15370 118 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 ACTL10Q5JWF8 245 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 OR4B1Q8NGF8 309 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 RPP21Q9H633 154 aaKnown RBP11.58□□□□□ -0.56
CTSA-202ENST00000354880 IL36BQ9NZH7 164 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 CMYA5Q8N3K9 4069 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 FABP5P3A8MUU1 101 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 CA1P00915 261 aaPredicted RBP11.58□□□□□ -0.56
CTSA-202ENST00000354880 PFN1P07737 140 aaKnown RBP11.58□□□□□ -0.56
CTSA-202ENST00000354880 HLA-DRB4P13762 266 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 CRISP2P16562 243 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 ZNF124Q15973 351 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 BEAN1Q3B7T3 259 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 KCNIP4Q6PIL6 250 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 APRG1Q8IVJ8 170 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 ZFAND2AQ8N6M9 145 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 YPEL4Q96NS1 127 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 ODF3Q96PU9 254 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 HLA-DRB4X5D2U9 266 aa11.58□□□□□ -0.56
CTSA-202ENST00000354880 IGKV3-20P01619 116 aa11.57□□□□□ -0.56
CTSA-202ENST00000354880 CMC4P56277 68 aaPredicted RBP11.57□□□□□ -0.56
CTSA-202ENST00000354880 CT83Q5H943 113 aa11.57□□□□□ -0.56
CTSA-202ENST00000354880 COLCA2A8K830 154 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 H3BMM0 161 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 J3KRW8 73 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 GPX1P07203 203 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 FAM3BP58499 235 aaPredicted RBP11.56□□□□□ -0.56
CTSA-202ENST00000354880 PRR9Q5T870 116 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 A8MWL6 223 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 TSKUQ8WUA8 353 aa11.56□□□□□ -0.56
CTSA-202ENST00000354880 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 SMIM27A0A1W2PRY6 76 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 A8MTW9 85 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 KLLNB2CW77 178 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 CD7P09564 240 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 LEPP41159 167 aa11.55□□□□□ -0.56
CTSA-202ENST00000354880 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
CTSA-202ENST00000354880 TGIF2-C20orf24A0A0A6YYL0 155 aa11.54□□□□□ -0.56
CTSA-202ENST00000354880 IGLL1P15814 213 aa11.54□□□□□ -0.56
CTSA-202ENST00000354880 RPL19P84098 196 aaKnown RBP11.54□□□□□ -0.56
CTSA-202ENST00000354880 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
CTSA-202ENST00000354880 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
CTSA-202ENST00000354880 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 CXCL1P09341 107 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 TSPOP30536 169 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 RNASE4P34096 147 aaKnown RBP11.53□□□□□ -0.56
CTSA-202ENST00000354880 CDKN1BP46527 198 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 TCL1AP56279 114 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 TRAV21A0A0B4J279 112 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 M0R2Z0 102 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 ORM1P02763 201 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 Q6AWC8 147 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 STHQ8IWL8 128 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 NEU1Q99519 415 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 PYGO2Q9BRQ0 406 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 C19orf73Q9NVV2 129 aa11.53□□□□□ -0.56
CTSA-202ENST00000354880 TRAV9-1A0A075B6T8 112 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 XKRY2A2RUG3 117 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 WIPF1O43516 503 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 Q6ZQT7 251 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 GFRA4Q9GZZ7 299 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 NAT8BQ9UHF3 227 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 PKD1L1Q8TDX9 2849 aa11.52□□□□□ -0.57
CTSA-202ENST00000354880 TMSB15BA0A087X1C1 80 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 HIGD1CA8MV81 97 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 GZMBP10144 247 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 GTSF1Q8WW33 167 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 BTF3L4Q96K17 158 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 FAM210BQ96KR6 192 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 C11orf21Q9P2W6 132 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 TRAV12-2A0A075B6T6 113 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 C7orf71A4D174 169 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 RBMY1BA6NDE4 496 aaKnown RBP11.51□□□□□ -0.57
CTSA-202ENST00000354880 RBMY1EA6NEQ0 496 aaKnown RBP11.51□□□□□ -0.57
CTSA-202ENST00000354880 RBMY1DP0C7P1 496 aaKnown RBP11.51□□□□□ -0.57
CTSA-202ENST00000354880 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
CTSA-202ENST00000354880 GFI1BQ5VTD9 330 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 GTSCR1Q86UQ5 136 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
CTSA-202ENST00000354880 IGKV3D-20A0A0C4DH25 116 aa11.5□□□□□ -0.57
CTSA-202ENST00000354880 RAB5AP20339 215 aa11.5□□□□□ -0.57
CTSA-202ENST00000354880 WFDC10AQ9H1F0 79 aa11.5□□□□□ -0.57
CTSA-202ENST00000354880 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
CTSA-202ENST00000354880 FXYD7P58549 80 aa11.49□□□□□ -0.57
CTSA-202ENST00000354880 TRPT1Q86TN4 253 aaKnown RBP11.49□□□□□ -0.57
CTSA-202ENST00000354880 ZNF324O75467 553 aaPredicted RBP11.49□□□□□ -0.57
CTSA-202ENST00000354880 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
CTSA-202ENST00000354880 ZNF575Q86XF7 245 aa11.49□□□□□ -0.57
CTSA-202ENST00000354880 NAGKQ9UJ70 344 aa11.49□□□□□ -0.57
CTSA-202ENST00000354880 SPINK4O60575 86 aa11.48□□□□□ -0.57
CTSA-202ENST00000354880 TYMSP04818 313 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms