RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 FHL2Q14192 279 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 C8orf49Q96NF6 230 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 NMES1Q9C002 83 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 WDR61Q9GZS3 305 aaKnown RBP9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
PRPF40A-201ENST00000354363 H0YIZ8 118 aa9.87□□□□□ -0.83
PRPF40A-201ENST00000354363 LRRC37A5PQ49AS3 106 aa9.87□□□□□ -0.83
PRPF40A-201ENST00000354363 LYPD5Q6UWN5 251 aa9.87□□□□□ -0.83
PRPF40A-201ENST00000354363 KCNIP2Q9NS61 270 aa9.87□□□□□ -0.83
PRPF40A-201ENST00000354363 PRAF2O60831 178 aa9.86□□□□□ -0.83
PRPF40A-201ENST00000354363 ZNF266Q14584 549 aa9.86□□□□□ -0.83
PRPF40A-201ENST00000354363 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-201ENST00000354363 MUC21Q5SSG8 566 aa9.86□□□□□ -0.83
PRPF40A-201ENST00000354363 TNFRSF18Q9Y5U5 241 aa9.86□□□□□ -0.83
PRPF40A-201ENST00000354363 RBAKDNA6NC62 111 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 OR7C2O60412 319 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 CSN1S1P47710 185 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 RANP62826 216 aaKnown RBP9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 C17orf112F2Z3M2 114 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 LINC00299Q6ZSB3 139 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 LYPD1Q8N2G4 141 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 MDFICQ9P1T7 246 aa9.85□□□□□ -0.83
PRPF40A-201ENST00000354363 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 SFTA3P0C7M3 94 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 ERVFC1-1P60608 527 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 CYCSP99999 105 aaKnown RBP9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 Q6AWC8 147 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 ENKURQ8TC29 256 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 S100ZQ8WXG8 99 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 PGPEP1Q9NXJ5 209 aa9.84□□□□□ -0.83
PRPF40A-201ENST00000354363 DIRC3C9JPN6 131 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 K7EQD1 137 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 EREGO14944 169 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 UBE2L3P68036 154 aaKnown RBP9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 IQCF2Q8IXL9 164 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 OR10G4Q8NGN3 311 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 RASL10AQ92737 203 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 ZNF479Q96JC4 524 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 ATP5SQ99766 215 aa9.83□□□□□ -0.84
PRPF40A-201ENST00000354363 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 FFAR4Q5NUL3 377 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 NFE4Q86UQ8 179 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 TMEM183AQ8IXX5 376 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 SPXQ9BT56 116 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 LENEPQ9Y5L5 61 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 GYPEP15421 78 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 SRIP30626 198 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 H2BFSP57053 126 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 KHDC3LQ587J8 217 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 CDPF1Q6NVV7 123 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 PPP1R1CQ8WVI7 109 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 HSPB11Q9Y547 144 aa9.82□□□□□ -0.84
PRPF40A-201ENST00000354363 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 TRAV9-2A0A087WT02 112 aa9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 UPK1BO75841 260 aa9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 DNAH10OSP0CZ25 163 aa9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 FAM159AQ6UWV7 190 aa9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 PCNPQ8WW12 178 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-201ENST00000354363 INMT-MINDY4F8WBC2 141 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 EIF3GO75821 320 aaKnown RBP eCLIP9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 TAS2R45P59539 299 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 IFITM3Q01628 133 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 TMED6Q8WW62 240 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 OTORQ9NRC9 128 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 PTTG2Q9NZH5 202 aa9.8□□□□□ -0.84
PRPF40A-201ENST00000354363 A0A087WTM6 91 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 TRAV4A0A0B4J268 109 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 EPM2AB3EWF7 344 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 MPC2O95563 127 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 ORM1P02763 201 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 XGP55808 180 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 TDRG1Q3Y452 100 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 SCGB1C1Q8TD33 95 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 HYLS1Q96M11 299 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 SMIM3Q9BZL3 60 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 NAGKQ9UJ70 344 aa9.79□□□□□ -0.84
PRPF40A-201ENST00000354363 PGPA6NDG6 321 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 K7EP13 123 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 GNRH2O43555 120 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 IFNA5P01569 189 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 RPH3ALQ9UNE2 315 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 FAT1Q14517 4588 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 IGHV3-16A0A0C4DH30 117 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 C9JCJ5 164 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 M0R2P5 195 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 EVI2AP22794 236 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 RPL12P30050 165 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 OR4C5Q8NGB2 326 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 TXNDC17Q9BRA2 123 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 MARVELD1Q9BSK0 173 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 MBD2Q9UBB5 411 aa9.78□□□□□ -0.84
PRPF40A-201ENST00000354363 LOC100131303A0A0U1RQF7 123 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 PET100P0DJ07 73 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 KRTAP10-1P60331 282 aa9.77□□□□□ -0.85
PRPF40A-201ENST00000354363 GOLT1AQ6ZVE7 132 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms