RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 PRR20CP86479 221 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 PRR20DP86480 221 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 PRR20BP86481 221 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 PRR20AP86496 221 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 LY6G5BQ8NDX9 201 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 USP9XQ93008 2570 aaPredicted RBP4.05□□□□□ -1.76
SKP1-202ENST00000353411 IGHV3-64A0A075B6Q5 118 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 CFAP126Q5VTH2 177 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 CCL13Q99616 98 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 THSD7BQ9C0I4 1608 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 TCL1BO95988 128 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 C4orf48Q5BLP8 95 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 SERTAD4-AS1Q5TG53 156 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 Q8N1Y9 231 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 PHLDA1Q8WV24 401 aaPredicted RBP4.05□□□□□ -1.76
SKP1-202ENST00000353411 TLN1Q9Y490 2541 aaKnown RBP4.05□□□□□ -1.76
SKP1-202ENST00000353411 NDUFA11Q86Y39 141 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 LYPD6Q86Y78 171 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 C21orf62Q9NYP8 219 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 LRP4O75096 1905 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 NDUFC2-KCTD14E9PQ53 114 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 EDN2P20800 178 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.05□□□□□ -1.76
SKP1-202ENST00000353411 LINC00312Q9Y6C7 94 aa4.05□□□□□ -1.76
SKP1-202ENST00000353411 RNASE2P10153 161 aaKnown RBP4.04□□□□□ -1.76
SKP1-202ENST00000353411 STHQ8IWL8 128 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 COX7CP15954 63 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 Q6P435 159 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FAM19A5Q7Z5A7 132 aaPredicted RBP4.04□□□□□ -1.76
SKP1-202ENST00000353411 DTX2Q86UW9 622 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 ICOSQ9Y6W8 199 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FAM236DA0A1B0GTK5 79 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FAM236CP0DP71 79 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FXYD5Q96DB9 178 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 VSIG2Q96IQ7 327 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 SMIM2Q9BVW6 85 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 ARRDC1-AS1Q9H2J1 176 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 ADAMTS20P59510 1910 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 EEF1AKMT3Q96AZ1 226 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FAM240AA0A1B0GVK7 77 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 A0A1B0GXF2 115 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 C20orf204Q6ZNR8 217 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 RASL10AQ92737 203 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 ZMAT4Q9H898 229 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FN1P02751 2386 aaKnown RBP4.04□□□□□ -1.76
SKP1-202ENST00000353411 TRAV13-2A0A0B4J235 113 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 FOXL2NBQ6ZUU3 175 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 Q8TCH9 128 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 IGFBPL1Q8WX77 278 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 ZNRF1Q8ND25 227 aa4.04□□□□□ -1.76
SKP1-202ENST00000353411 RS1O15537 224 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 BAALC-AS2P0C853 105 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 PRRG2O14669 202 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 CRYGBP07316 175 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 TRAV3A0A0B4J244 114 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 TP53TG1Q9Y2A0 90 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 IGKV2-40A0A087WW87 121 aaPredicted RBP4.03□□□□□ -1.76
SKP1-202ENST00000353411 IGKV2D-40P01614 121 aaPredicted RBP4.03□□□□□ -1.76
SKP1-202ENST00000353411 IGLV3-1P01715 115 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 Q8N976 141 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 TMEM133Q9H2Q1 129 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 IGHV1-69DA0A0B4J2H0 117 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 LINC01619G3V211 115 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 ECSCRQ19T08 205 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 RSPO4Q2I0M5 234 aaPredicted RBP4.03□□□□□ -1.76
SKP1-202ENST00000353411 TMEM167AQ8TBQ9 72 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 CFHR4Q92496 578 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 ZNF581Q9P0T4 197 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 COL4A6Q14031 1691 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 SPINK14Q6IE38 97 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 SHANK2-AS3Q9BTD1 123 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 DKK4Q9UBT3 224 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 LGALS9O00182 355 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 IGLC6P0CF74 106 aa4.03□□□□□ -1.76
SKP1-202ENST00000353411 SNRPD3P62318 126 aaKnown RBP4.03□□□□□ -1.76
SKP1-202ENST00000353411 NTN3O00634 580 aaPredicted RBP4.02□□□□□ -1.77
SKP1-202ENST00000353411 P0DMU3 169 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 FAM231AP0DMU4 169 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 FAM231CP0DMU5 169 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
SKP1-202ENST00000353411 SIGLEC9Q9Y336 463 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 IGHV3-72A0A0B4J1Y9 119 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 TRAV17A0A0B4J275 112 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 OVOL1O14753 267 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 NDUFC1O43677 76 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 MRPS36P82909 103 aaKnown RBP4.02□□□□□ -1.77
SKP1-202ENST00000353411 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 PMS2CLQ68D20 193 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 ZNF474Q6S9Z5 364 aaPredicted RBP4.02□□□□□ -1.77
SKP1-202ENST00000353411 SERP2Q8N6R1 65 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 TRBV19A0A075B6N1 114 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 HTN1P15515 57 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 LINC00526Q96FQ7 95 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 IGHV1-45A0A0A0MS14 117 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 F6UB75 175 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 ITLN1Q8WWA0 313 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 ZNF837Q96EG3 531 aaPredicted RBP4.02□□□□□ -1.77
SKP1-202ENST00000353411 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
SKP1-202ENST00000353411 PSMB8P28062 276 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms